Evidence map›Paper›PMID 30905073›Full record

ArticleCancer medicine2019

The human ATF1 rs11169571 polymorphism associated with risk of nasopharyngeal carcinoma in Southern Chinese populations.

Shutang Peng, Guo-Liang Huang, Nansong Xu, Yan Lu, Liuyan Zeng, Xin Li, Shengqun Luo, Xiaoming Lyu, Qiang Jiang, Tong Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 2 citations in OpenAlex.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Shutang PengChina-American Cancer Research Institute, Dongguan Scientific Research Center, Guangdong Medical University, Dongguan, China.ORCID 0000-0001-5005-9842
Guo-Liang HuangChina-American Cancer Research Institute, Dongguan Scientific Research Center, Guangdong Medical University, Dongguan, China.
Nansong XuChina-American Cancer Research Institute, Dongguan Scientific Research Center, Guangdong Medical University, Dongguan, China.
Yan LuChina-American Cancer Research Institute, Dongguan Scientific Research Center, Guangdong Medical University, Dongguan, China.
Liuyan ZengDepartment of Health Management Center, The Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Xin LiCancer Research Institute, Southern Medical University, Guangzhou, China.
Shengqun LuoChina-American Cancer Research Institute, Dongguan Scientific Research Center, Guangdong Medical University, Dongguan, China.
Xiaoming LyuDepartment of Laboratory Medicine, The Third Affiliated Hospital of Southern Medical University, Guangzhou, China.
Qiang JiangCancer Research Institute, Southern Medical University, Guangzhou, China.
Tong LiChina-American Cancer Research Institute, Dongguan Scientific Research Center, Guangdong Medical University, Dongguan, China.
Zhiwei HeChina-American Cancer Research Institute, Dongguan Scientific Research Center, Guangdong Medical University, Dongguan, China.
Guangdong Medical College · CNSouthern Medical University · CNThird Affiliated Hospital of Southern Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our previous work reported activating transcription factor 1 (ATF1) is a promotive factor of nasopharyngeal carcinoma (NPC) tumorigenesis. This study is to further explore the association between the human ATF1 rs11169571 polymorphism and the risk of NPC occurrence. The association between ATF1 rs11169571 and risk of NPC occurrence was investigated in clinical samples of 560 patients and 661 controls obtained from southern China with high incidence of NPC. The genotypes were detected by PCR-RFLP. The differential expression activity of alleles -T and -C was analyzed with CNE-2 and C666-1 cells by luciferase reporter assay. Our data suggested that the allelic frequency and genotypes were significantly different between patients and controls. Compared to the TT homozygote, the TC and CC genotypes have been shown to be significantly decreased in NPC patients (OR = 0.494, 95% CI = 0.387-0.629, P < 0.001 and OR = 0.556, 95% CI = 0.364-0.851, P = 0.007, respectively). Compared to the -T allele, the -C allele is a factor of decreased risk in NPC (OR = 0.642, 95% CI = 0.537-0.767, P < 0.001). Luciferase reporter activity revealed that the -T allele confers a higher expression activity than the -C allele in CNE2 cells and C666-1 cells. In conclusion, ATF1 rs11169571 which could affect the expression of ATF1 is associated with NPC risk.

Indexed as

Polymorphism, Single NucleotideActivating Transcription Factor 1AdultAgedCase-Control StudiesChinaFemaleGene Expression Regulation, NeoplasticGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansLymphatic MetastasisMaleMiddle AgedNasopharyngeal CarcinomaActivating Transcription Factor 1ATF1 protein, humanATF1microRNAnasopharyngeal carcinomapolymorphismrisk

Identifiers

PMID30905073
PMCPMC6488110
OpenAlexW2942858060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.