Evidence map›Paper›PMID 30903387›Full record

ArticleJournal of the American Society for Mass Spectrometry2019

Proteomic Analysis of FNR-Regulated Anaerobiosis in Salmonella Typhimurium.

Zhen Wang, Jingjing Sun, Mengdan Tian, Zeling Xu, Yanhua Liu, Jiaqi Fu, Aixin Yan, Xiaoyun Liu

Abstract read
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In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhen WangInstitute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, China.
Jingjing SunSchool of Biological Sciences, The University of Hong Kong, Pok Fu Lam Rd, Hong Kong SAR, China.
Mengdan TianSchool of Biological Sciences, The University of Hong Kong, Pok Fu Lam Rd, Hong Kong SAR, China.
Zeling XuSchool of Biological Sciences, The University of Hong Kong, Pok Fu Lam Rd, Hong Kong SAR, China.
Yanhua LiuInstitute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, China.
Jiaqi FuInstitute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, China.
Aixin YanSchool of Biological Sciences, The University of Hong Kong, Pok Fu Lam Rd, Hong Kong SAR, China. ayan8@hku.hk.
Xiaoyun LiuInstitute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, China. xiaoyun.liu@pku.edu.cn.ORCID http://orcid.org/0000-0001-7083-5263

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial pathogens such as Salmonella enterica serovar Typhimurium (S. Typhimurium) have to cope with fluctuating oxygen levels during infection within host gastrointestinal tracts. The global transcription factor FNR (fumarate nitrate reduction) plays a vital role in the adaptation of enteric bacteria to the low oxygen environment. Nevertheless, a comprehensive profile of the FNR regulon on the proteome level is still lacking in S. Typhimurium. Herein, we quantitatively profiled S. Typhimurium proteome of an fnr-deletion mutant during anaerobiosis in comparison to its parental strain. Notably, we found that FNR represses the expression of virulence genes of Salmonella pathogenicity island 1 (SPI-1) and negatively regulates propanediol utilization by directly binding to the promoter region of the pdu operon. Importantly, we provided evidence that S. Typhimurium lacking fnr exhibited increased antibiotics susceptibility and membrane permeability as well. Furthermore, genetic deletion of fnr leads to decreased bacterial survival in a Caenorhabditis elegans infection model, highlighting an important role of this regulator in mediating host-pathogen interactions.

Indexed as

AnaerobiosisAnimalsBacterial ProteinsCaenorhabditis elegansDNA-Binding ProteinsGene Expression Regulation, BacterialHumansOxygenPropylene GlycolsProtein Interaction MapsProteomicsSalmonella InfectionsSalmonella typhimuriumTranscription FactorsBacterial ProteinsDNA-Binding Proteinsfnr protein, S typhimuriumOxygenPropylene GlycolsTranscription FactorsAnaerobiosisQuantitative proteomicsSalmonella TyphimuriumThe FNR regulon

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.