Evidence map›Paper›PMID 30902895›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Structure of HIV-1 RT/dsRNA initiation complex prior to nucleotide incorporation.

Kalyan Das, Sergio E Martinez, Jeffrey J DeStefano, Eddy Arnold

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Machine learning-optimized targeted detection of alternative splicing.bioRxiv : the preprint server for biology · 2024
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Cryo-EM structures of wild-type and E138K/M184I mutant HIV-1 RT/DNA complexed with inhibitors doravirine and rilpivirine.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kalyan DasCenter for Advanced Biotechnology and Medicine, Rutgers University, Piscataway, NJ 08854; kalyan.das@kuleuven.be arnold@cabm.rutgers.edu.ORCID 0000-0002-8897-324X
Sergio E MartinezCenter for Advanced Biotechnology and Medicine, Rutgers University, Piscataway, NJ 08854.
Jeffrey J DeStefanoDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742.
Eddy ArnoldCenter for Advanced Biotechnology and Medicine, Rutgers University, Piscataway, NJ 08854; kalyan.das@kuleuven.be arnold@cabm.rutgers.edu.

Funding

X-ray Crystallographic Fragment Screening CoreU54AI150472 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI SARAFIANOS, STEFAN G, TORBETT, BRUCE EDWARD · 2019 to 2021
$15.7M
STRUCTURES OF HIV REVERSE TRANSCRIPTASE WITH SUBSTRATESR37AI027690 · NIAID · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI ARNOLD, EDWARD · 1999 to 2018
$14.4M
X-ray Crystallographic Fragment Screening CoreU54GM103368 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SARAFIANOS, STEFAN G, TORBETT, BRUCE EDWARD · 2017 to 2018
$11.1M
STRUCTURES OF HIV REVERSE TRANSCRIPTASE WITH SUBSTRATESR01AI027690 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI EDWARD ARNOLD · 1989 to 2026
$4.3M
Biochemistry of HIV reverse transcriptase fidelity and inhibitor interactionsR01GM116645 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI DESTEFANO, JEFFREY J · 2016 to 2018
$924k
Biochemistry of HIV reverse transcriptase fidelity and inhibitor interactionsR01AI150480 · NIAID · UNIV OF MARYLAND, COLLEGE PARK · PI DESTEFANO, JEFFREY J · 2019 to 2019
$294k
NIAID NIH HHS R01 AI027690NIAID NIH HHS R01 AI150480NIAID NIH HHS R37 AI027690NIGMS NIH HHS R01 GM116645NIGMS NIH HHS U54 GM103368
6 · The paper itself

Abstract

The initiation phase of HIV reverse transcription has features that are distinct from its elongation phase. The first structure of a reverse transcription initiation complex (RTIC) that trapped the complex after incorporation of one ddCMP nucleotide was published recently [Larsen KP, et al. (2018)

Indexed as

Crystallography, X-RayHIV-1HIV Reverse TranscriptaseRNA, Double-StrandedRNA, Transfer, LysRNA, ViralHIV Reverse Transcriptasereverse transcriptase, Human immunodeficiency virus 1RNA, Double-StrandedRNA, Transfer, LysRNA, ViralDNA polymerasedouble-stranded RNA structureHIV reverse transcriptasereverse transcription initiationRTIC

Identifiers

PMID30902895
PMCPMC6462067

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.