Evidence map›Paper›PMID 30901897›Full record

ArticleMolecules (Basel, Switzerland)2019

The Polymorphisms of Oligonucleotide Probes in Wheat Cultivars Determined by ND-FISH.

Tianheng Ren, Maojie He, Zixin Sun, Feiquan Tan, Peigao Luo, Zongxiang Tang, Shulan Fu, Benju Yan, Zhenglong Ren, Zhi Li

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Chromosomal analysis of progenies betweenFrontiers in plant science · 2024
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  11. New ND-FISH-Positive Oligo Probes for IdentifyingInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Tianheng RenCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, China. renth@sicau.edu.cn.
Maojie HeProvincial Key Laboratory for Plant Genetics and Breeding, Wenjiang, Chengdu 611130, Sichuan, China. hemaojieo@163.com.
Zixin SunCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, China. szx080598@163.com.
Feiquan TanCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, China. tanfq@sicau.edu.cn.
Peigao LuoCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, China. lpglab@sicau.edu.cn.ORCID 0000-0002-4603-6960
Zongxiang TangCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, China. zxtang@sicau.edu.cn.
Shulan FuCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, China. fusl@sina.com.
Benju YanProvincial Key Laboratory for Plant Genetics and Breeding, Wenjiang, Chengdu 611130, Sichuan, China. yanbenju@sicau.edu.cn.
Zhenglong RenCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, China. renzllab@sicau.edu.cn.
Zhi LiProvincial Key Laboratory for Plant Genetics and Breeding, Wenjiang, Chengdu 611130, Sichuan, China. lizhi@sicau.edu.cn.
Sichuan Agricultural University · CN

Funding

National Natural Science Foundation of China 31801357
6 · The paper itself

Abstract

Non-denaturing fluorescence in situ hybridization (ND-FISH) has been used to distinguish wheat chromosomes and to detect alien chromosomes in the wheat genome. In this study, five different oligonucleotide probes were used with ND-FISH to examine 21 wheat cultivars and lines. These oligonucleotide probes distinguished 42 wheat chromosomes and also detected rye chromatin in the wheat genome. Moreover, the signal patterns of the oligonucleotide probes Oligo-pTa535-1 and Oligo-pSc119.2-1 showed high polymorphism in the wheat chromosomes. A total of 17.6% of the A group chromosomes, 25.9% of the B group chromosomes and 8.9% of the D group chromosomes showed obvious mutations when they were compared to the standard ND-FISH signal patterns, and most of them were Oligo-pSc119.2-1 mutants. The results suggested that these polymorphisms could be induced by the crossing of wheat cultivars. The results provided more information for the further application of oligonucleotide probes and ND-FISH.

Indexed as

In Situ Hybridization, FluorescenceOligonucleotide ProbesPolymorphism, GeneticChromosomes, PlantGenome, PlantMutationTriticumOligonucleotide ProbeschromosomemutantND-FISHOligo-pSc119.2-1Oligo-pTa535-1wheat

Identifiers

PMID30901897
PMCPMC6471732
OpenAlexW2925048754

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.