Evidence map›Paper›PMID 30897187›Full record

ArticlePLoS pathogens2019

Low levels of SIV-specific CD8+ T cells in germinal centers characterizes acute SIV infection.

Shengbin Li, Joy M Folkvord, Katalin J Kovacs, Reece K Wagstaff, Gwantwa Mwakalundwa, Aaron K Rendahl, Eva G Rakasz, Elizabeth Connick, Pamela J Skinner

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. HIV reservoirs in lymphomagenesis: hidden driver in the era of viral suppression?Microbiology and molecular biology reviews : MMBR · 2025
    Review
  4. Article
  5. Compartmental structure in the secondary lymphoid tissue can slow downJournal of the Royal Society, Interface · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. Cytolytic CD8Science immunology · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. HIV specific CD8Frontiers in immunology · 2022
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Shengbin LiDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, Minnesota, United States of America.
Joy M FolkvordDivision of Infectious Diseases, University of Arizona, Tucson, Arizona, United States of America.
Katalin J KovacsDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, Minnesota, United States of America.
Reece K WagstaffDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, Minnesota, United States of America.
Gwantwa MwakalundwaDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, Minnesota, United States of America.
Aaron K RendahlDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, Minnesota, United States of America.ORCID 0000-0001-5434-3592
Eva G RakaszWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Elizabeth ConnickDivision of Infectious Diseases, University of Arizona, Tucson, Arizona, United States of America.
Pamela J SkinnerDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, Minnesota, United States of America.ORCID 0000-0003-3388-1687
University of Minnesota · USUniversity of Arizona · USUniversity of Wisconsin–Madison · US

Funding

WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
ZOLEDRONATE PREVENTS BONE LOSS IN OVARIECTOMIZED RHESUS MONKEYSP51RR000167 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI WATKINS, DAVID I · 1985 to 2011
$106.7M
BELIEVE: Bench to Bed Enhanced Lymphocyte Infusions to Engineer Viral EradicationUM1AI126617 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI JONES, R. BRAD, NIXON, DOUGLAS F · 2016 to 2020
$28.1M
RESOURCE FOR NONHUMAN PRIMATE CELL DEPLETING ANTIBODIESR24RR016001 · NCRR · BETH ISRAEL DEACONESS MEDICAL CENTER · PI REIMANN, KEITH A. · 2000 to 2011
$8.1M
Mechanisms Underlying Persistent Lentivirus Replication in Follicular T CellsR01AI096966 · NIAID · UNIVERSITY OF COLORADO DENVER · PI CONNICK, ELIZABETH, SKINNER, PAMELA J · 2013 to 2017
$4.2M
Targeting virus-specific CAR T cells to lymphoid follicles to achieve durable HIV suppressionR01AI143380 · NIAID · UNIVERSITY OF MINNESOTA · PI SKINNER, PAMELA J · 2019 to 2023
$3.7M
NCRR NIH HHS P51 RR000167NCRR NIH HHS R24 RR016001NIAID NIH HHS HHSN272200900037CNIAID NIH HHS HHSN272201300006CNIAID NIH HHS R01 AI096966NIAID NIH HHS R01 AI143380NIAID NIH HHS UM1 AI126617NIH HHS P51 OD011106
6 · The paper itself

Abstract

CD8+ T cells play an important role in controlling of HIV and SIV infections. However, these cells are largely excluded from B cell follicles where HIV and SIV producing cells concentrate during chronic infection. It is not known, however, if antigen-specific CD8+ T cells are excluded gradually as pathogenesis progresses from early to chronic phase, or this phenomenon occurs from the beginning infection. In this study we determined that SIV-specific CD8+ T cells were largely excluded from follicles during early infection, we also found that within follicles, they were entirely absent in 60% of the germinal centers (GCs) examined. Furthermore, levels of SIV-specific CD8+ T cells in follicular but not extrafollicular areas significantly correlated inversely with levels of viral RNA+ cells. In addition, subsets of follicular SIV-specific CD8+ T cells were activated and proliferating and expressed the cytolytic protein perforin. These studies suggest that a paucity of SIV-specific CD8+ T cells in follicles and complete absence within GCs during early infection may set the stage for the establishment of persistent chronic infection.

Indexed as

Acute DiseaseAnimalsB-LymphocytesCD8-Positive T-LymphocytesGerminal CenterMacaca mulattaSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusViral LoadVirus Replication

Identifiers

PMID30897187
PMCPMC6445460
OpenAlexW2923634436

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.