Evidence map›Paper›PMID 30893890›Full record

ArticlePathogens (Basel, Switzerland)2019

Metagenomic Characterization of Bacterial Communities on Ready-to-Eat Vegetables and Effects of Household Washing on their Diversity and Composition.

Soultana Tatsika, Katerina Karamanoli, Hera Karayanni, Savvas Genitsaris

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Antibiotic Resistance Genes and Microbiota inJournal of agricultural and food chemistry · 2025
    Article
  6. Review
  7. Review
  8. Seasonal Changes in the Microbial Communities on Lettuce (Journal of microbiology and biotechnology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Quality and Safety Assessment of Edible SeaweedsFoods (Basel, Switzerland) · 2021
    Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Soultana TatsikaSchool of Economics, Business Administration and Legal Studies, International Hellenic University, 57001 Thermi, Greece. s.tatsika@ihu.edu.gr.
Katerina KaramanoliSchool of Agriculture, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece. katkar@agro.auth.gr.
Hera KarayanniDepartment of Biological Applications and Technology, University of Ioannina, 45100 Ioannina, Greece. hkaray@uoi.gr.ORCID 0000-0001-7099-5611
Savvas GenitsarisSchool of Economics, Business Administration and Legal Studies, International Hellenic University, 57001 Thermi, Greece. s.genitsaris@ihu.edu.gr.ORCID 0000-0003-0585-2571

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ready-to-eat (RTE) leafy salad vegetables are considered foods that can be consumed immediately at the point of sale without further treatment. The aim of the study was to investigate the bacterial community composition of RTE salads at the point of consumption and the changes in bacterial diversity and composition associated with different household washing treatments. The bacterial microbiomes of rocket and spinach leaves were examined by means of 16S rRNA gene high-throughput sequencing. Overall, 886 Operational Taxonomic Units (OTUs) were detected in the salads' leaves. Proteobacteria was the most diverse high-level taxonomic group followed by Bacteroidetes and Firmicutes. Although they were processed at the same production facilities, rocket showed different bacterial community composition than spinach salads, mainly attributed to the different contributions of Proteobacteria and Bacteroidetes to the total OTU number. The tested household decontamination treatments proved inefficient in changing the bacterial community composition in both RTE salads. Furthermore, storage duration of the salads at refrigeration temperatures affected the microbiome, by decreasing the bacterial richness and promoting the dominance of psychrotropic bacteria. Finally, both salads were found to be a reservoir of opportunistic human pathogens, while washing methods usually applied at home proved to be inefficient in their removal.

Indexed as

16S rRNA genefoodborne pathogensfresh producehousehold treatmentsilluminaPseudomonasReady-to-eat salads

Identifiers

PMID30893890
PMCPMC6471099

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.