Evidence map›Paper›PMID 30889282›Full record

ArticleMedical physics2019

A deep learning- and partial least square regression-based model observer for a low-contrast lesion detection task in CT.

Hao Gong, Lifeng Yu, Shuai Leng, Samantha K Dilger, Liqiang Ren, Wei Zhou, Joel G Fletcher, Cynthia H McCollough

Abstract read
In one paragraph

Article in Medical physics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Trial
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  12. Deep Learning Based Staging of Bone Lesions From Computed Tomography Scans.IEEE access : practical innovations, open solutions · 2021
    Article
  13. Article
  14. Deep Learning Based Model Observer by U-Net.Proceedings of SPIE--the International Society for Optical Engineering · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hao GongDepartment of Radiology, Mayo Clinic, Rochester, MN, 55905, USA.
Lifeng YuDepartment of Radiology, Mayo Clinic, Rochester, MN, 55905, USA.
Shuai LengDepartment of Radiology, Mayo Clinic, Rochester, MN, 55905, USA.
Samantha K DilgerDepartment of Radiology, Mayo Clinic, Rochester, MN, 55905, USA.
Liqiang RenDepartment of Radiology, Mayo Clinic, Rochester, MN, 55905, USA.
Wei ZhouDepartment of Radiology, Mayo Clinic, Rochester, MN, 55905, USA.
Joel G FletcherDepartment of Radiology, Mayo Clinic, Rochester, MN, 55905, USA.
Cynthia H McColloughDepartment of Radiology, Mayo Clinic, Rochester, MN, 55905, USA.

Funding

Trade-offs in human observer performance, image quality metrics, and patient doseR01EB017095 · NIBIB · MAYO CLINIC ROCHESTER · PI Hao Gong, Cynthia H McCollough · 2012 to 2026
$7.0M
Critical resources to evaluate CT scan techniques and dose reduction approachesU01EB017185 · NIBIB · MAYO CLINIC ROCHESTER · PI MCCOLLOUGH, CYNTHIA H · 2013 to 2016
$3.6M
NIBIB NIH HHS R01 EB017095NIBIB NIH HHS U01 EB017185NIH HHS R01 EB017095NIH HHS U01 EB017185
6 · The paper itself

Abstract

purposeThis work aims to develop a new framework of image quality assessment using deep learning-based model observer (DL-MO) and to validate it in a low-contrast lesion detection task that involves CT images with patient anatomical background.

methodsThe DL-MO was developed using the transfer learning strategy to incorporate a pretrained deep convolutional neural network (CNN), a partial least square regression discriminant analysis (PLS-DA) model and an internal noise component. The CNN was previously trained to achieve the state-of-the-art classification accuracy over a natural image database. The earlier layers of the CNN were used as a deep feature extractor, with the assumption that similarity exists between the CNN and the human visual system. The PLSR model was used to further engineer the deep feature for the lesion detection task in CT images. The internal noise component was incorporated to model the inefficiency and variability of human observer (HO) performance, and to generate the ultimate DL-MO test statistics. Seven abdominal CT exams were retrospectively collected from the same type of CT scanners. To compare DL-MO with HO, 12 experimental conditions with varying lesion size, lesion contrast, radiation dose, and reconstruction types were generated, each condition with 154 trials. CT images of a real liver metastatic lesion were numerically modified to generate lesion models with four lesion sizes (5, 7, 9, and 11 mm) and three contrast levels (15, 20, and 25 HU). The lesions were inserted into patient liver images using a projection-based method. A validated noise insertion tool was used to synthesize CT exams with 50% and 25% of routine radiation dose level. CT images were reconstructed using the weighted filtered back projection algorithm and an iterative reconstruction algorithm. Four medical physicists performed a two-alternative forced choice (2AFC) detection task (with multislice scrolling viewing mode) on patient images across the 12 experimental conditions. DL-MO was operated on the same datasets. Statistical analyses were performed to evaluate the correlation and agreement between DL-MO and HO.

resultsA statistically significant positive correlation was observed between DL-MO and HO for the 2AFC low-contrast detection task that involves patient liver background. The corresponding Pearson product moment correlation coefficient was 0.986 [95% confidence interval (0.950, 0.996)]. Bland-Altman agreement analysis did not indicate statistically significant differences.

conclusionsThe proposed DL-MO is highly correlated with HO in a low-contrast detection task that involves realistic patient liver background. This study demonstrated the potential of the proposed DL-MO to assess image quality directly based on patient images in realistic, clinically relevant CT tasks.

Indexed as

Deep LearningModels, StatisticalAlgorithmsHumansImage Processing, Computer-AssistedLeast-Squares AnalysisLiver NeoplasmsNeural Networks, ComputerObserver VariationRadiotherapy DosageRadiotherapy Planning, Computer-AssistedRetrospective StudiesTomography, X-Ray Computedcomputed tomographyCT protocol optimizationdeep learningimage quality assessmentmodel observer

Identifiers

PMID30889282
PMCPMC6510615

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.