Evidence map›Paper›PMID 30889180›Full record

ArticlePloS one2019

Isolation and expression analysis of Salt Overly Sensitive gene family in grapevine (Vitisvinifera) in response to salt and PEG stress.

Yuanchun Ma, Li Wang, Jiaoyang Wang, Yan Zhong, Zong-Ming Max Cheng

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Coastal Wild Grapevine Accession (Plants (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. Salt stress proteins in plants: An overview.Frontiers in plant science · 2022
    Review
  11. Article
  12. Conservation and divergence of thePhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  13. Regulation ofFrontiers in plant science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Yuanchun MaCollege of Horticulture, Nanjing Agricultural University, Nanjing, Jiangsu province, The People's Republic of China.
Li WangCollege of Horticulture, Nanjing Agricultural University, Nanjing, Jiangsu province, The People's Republic of China.
Jiaoyang WangCollege of Horticulture, Nanjing Agricultural University, Nanjing, Jiangsu province, The People's Republic of China.
Yan ZhongCollege of Horticulture, Nanjing Agricultural University, Nanjing, Jiangsu province, The People's Republic of China.
Zong-Ming Max ChengCollege of Horticulture, Nanjing Agricultural University, Nanjing, Jiangsu province, The People's Republic of China.ORCID 0000-0002-4702-0573
Nanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salt stress is one of the major environmental constraints for the production and yield of grape (Vitis vinifera) worldwide. The SOS3 gene family is part of the Salt Overly Sensitive (SOS) signaling pathway, a well-defined signaling pathway known to play a role in plant response to salt stress. In this study, the grapevine SOS3 gene family was annotated and the role of the annotated genes in salinity stress response was characterized. Nine grapevine SOS3 genes was identified in the grapevine genome and was subsequently analyzed. The expression patterns of the nine VviSOS3 genes, as determined by reverse transcription quantitative PCR (RT-qPCR), varied greatly in leaves, roots, and stems of in-vitro grown Pinot noir grapevine cultivar(PN40024) in response to salt (250mM NaCl) and polyethylene glycol 6000 (PEG, osmolality equal to the salt treatment) treatments over a 36h time period. All of the VviSOS3 genes, except VviSOS3.7, were up-regulated in leaves in response to the salt and PEG treatments. The majority of VviSOS3 genes, except VviSOS3.8 were up-regulated in roots in response to the PEG stress, with an opposite expression pattern in the root and stem in response to salt stress. The salinity treatment decreased the soluble protein content. Based on the expression pattern and physiological data, VviSOS3.7 and VviSOS3.8 were identified as candidate genes for further functional characterizations regarding their role in the response of grapevine to salt stress.

Indexed as

Genes, PlantSalinityVitisGene Expression Regulation, PlantMolecular Sequence AnnotationOsmotic PressurePolyethylene GlycolsPolyethylene Glycols

Identifiers

PMID30889180
PMCPMC6424420
OpenAlexW2924839530

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.