Evidence map›Paper›PMID 30887305›Full record

ArticleGenes & genomics2019

Comparative transcriptome analysis of salt-sensitive and salt-tolerant maize reveals potential mechanisms to enhance salt resistance.

Mingquan Wang, Yufeng Wang, Yifei Zhang, Chunxia Li, Shichen Gong, Shuqin Yan, Guoliang Li, Guanghui Hu, Honglei Ren, Jianfei Yang and 2 more

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Article in Genes & genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 69 citations in OpenAlex.

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  18. Reshifting NaPlants (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Mingquan WangCollege of Agronomy, Heilongjiang Bayi Agricultural University/Key Laboratory of Crop Germplasm Improvement and Cultivation in Cold Regions of Education Department, Daqing, 163319, China.
Yufeng WangCollege of Agronomy, Heilongjiang Bayi Agricultural University/Key Laboratory of Crop Germplasm Improvement and Cultivation in Cold Regions of Education Department, Daqing, 163319, China.
Yifei ZhangCollege of Agronomy, Heilongjiang Bayi Agricultural University/Key Laboratory of Crop Germplasm Improvement and Cultivation in Cold Regions of Education Department, Daqing, 163319, China.
Chunxia LiMaize Research Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Shichen GongMaize Research Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Shuqin YanMaize Research Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Guoliang LiMaize Research Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Guanghui HuMaize Research Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Honglei RenMaize Research Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Jianfei YangMaize Research Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Tao YuMaize Research Institute of Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Kejun YangCollege of Agronomy, Heilongjiang Bayi Agricultural University/Key Laboratory of Crop Germplasm Improvement and Cultivation in Cold Regions of Education Department, Daqing, 163319, China. byyangkejun@163.com.
Heilongjiang Provincial Academy of Agricultural Sciences · CNHeilongjiang Bayi Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSalt stress is a devastating environmental stress that causes plant growth inhibition and yield reduction.

objectiveThe identification of salt-tolerant genes brings hope for the generation of salinity-tolerant crop plants through molecular breeding.

methodsIn this study, one salt-sensitive and one salt-tolerant maize inbred line were screened from 242 maize inbred lines. Reactive oxygen species (ROS)-related enzyme activities were detected and salt-responsive comparative transcriptome analysis was performed for control and 220 mM NaCl treated maize leaves.

resultsSalt-tolerant maize inbred line (L87) showed higher ROS-related enzyme (SOD, POD, APX and CAT) activities and accumulated relatively lower levels of ROS under salt stress. Of the total DEGs, 1856 upregulated DEGs were specific to L87, including stress tolerance-related members of the 70kDa family of heat shock proteins (Hsp70s) and aquaporins. The DEGs involved in the abscisic acid (ABA), ethylene, jasmonic acid (JA) and salicylic acid (SA) signal transduction pathways may determine the difference in salt tolerance between the two varieties, especially one central component SnRK2, that positively regulates ABA signaling and was only upregulated in L87. Analysis of DEGs related to ROS scavenging showed that some peroxidase (POD), glutathione S-transferase (GST), catalase (CAT) and superoxide dismutase (SOD) genes specific to L87 probably enhanced its salt tolerance. The analysis of differentially expressed transcription factors (TFs) suggested that WRKY TFs could contribute to the difference in salt tolerance between the two maize lines.

conclusionCompared with Salt-sensitive maize inbred line (L29), L87 exhibits specific regulatory mechanisms related to salt tolerance, including plant hormone interactions, ROS scavenging and the regulation of TFs. Our study identifies new candidate genes that may regulate maize tolerance to salt stress and provides useful information for breeding maize with high salt resistance.

Indexed as

TranscriptomeCatalaseGlutathione TransferasePeroxidasePlant ProteinsSalt ToleranceSuperoxide DismutaseTranscription FactorsZea maysCatalaseGlutathione TransferasePeroxidasePlant ProteinsSuperoxide DismutaseTranscription FactorsDifferentially expressed genesHormone signaling pathwaysMaizeRNA-SeqSalt stressTranscription factors

Identifiers

PMID30887305
OpenAlexW2924595959

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.