Evidence map›Paper›PMID 30886000›Full record

ArticleEMBO reports2019

Loss of genomic integrity induced by lysosphingolipid imbalance drives ageing in the heart.

Gaurav Ahuja, Deniz Bartsch, Wenjie Yao, Simon Geissen, Stefan Frank, Aitor Aguirre, Nicole Russ, Jan-Erik Messling, Joanna Dodzian, Kim A Lagerborg and 14 more

Abstract read
In one paragraph

Article in EMBO reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Immune aging in annual killifish.Immunity & ageing : I & A · 2024
    Review
  7. Article
  8. Article
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  12. Article
  13. Article
  14. Article
  15. The aging transcriptome: read between the lines.Current opinion in neurobiology · 2020
    Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 4 institutions in 2 countries.

Gaurav AhujaCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Deniz BartschCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Wenjie YaoCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Simon GeissenCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Stefan FrankCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Aitor AguirreDepartments of Medicine & Pharmacology, University of California San Diego, San Diego, CA, USA.
Nicole RussCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Jan-Erik MesslingCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Joanna DodzianCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Kim A LagerborgDepartments of Medicine & Pharmacology, University of California San Diego, San Diego, CA, USA.
Natalia Emilse VargasCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Joscha Sergej MuckMax Planck Institute for Biology of Ageing, Cologne, Germany.
Susanne BrodesserCECAD; Cologne Cluster of Excellence in Cellular Stress Responses in Ageing-associated Diseases, University of Cologne, Cologne, Germany.
Stephan BaldusCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Agapios SachinidisInstitute for Neurophysiology, Faculty of Medicine and University Hospital, University of Cologne, Cologne, Germany.
Juergen HeschelerInstitute for Neurophysiology, Faculty of Medicine and University Hospital, University of Cologne, Cologne, Germany.
Christoph DieterichDepartment of Internal Medicine III, University Hospital Heidelberg & German Center for Cardiovascular Research (DZHK), Heidelberg, Germany.
Aleksandra TrifunovicCECAD; Cologne Cluster of Excellence in Cellular Stress Responses in Ageing-associated Diseases, University of Cologne, Cologne, Germany.ORCID 0000-0002-5472-3517
Argyris PapantonisCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.ORCID 0000-0001-7551-1073
Michael PetrascheckThe Scripps Research Institute, La Jolla, CA, USA.
Anna KlinkeCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Mohit JainDepartments of Medicine & Pharmacology, University of California San Diego, San Diego, CA, USA.
Dario Riccardo ValenzanoMax Planck Institute for Biology of Ageing, Cologne, Germany valenzano@age.mpg.de leo.kurian@uni-koeln.de.ORCID 0000-0002-8761-8289
Leo KurianCenter for Molecular Medicine Cologne, University of Cologne, Cologne, Germany valenzano@age.mpg.de leo.kurian@uni-koeln.de.ORCID 0000-0001-7466-5169
University of Cologne · DEUniversity of California San Diego · USHeidelberg University · DEScripps Research Institute · US

Funding

Mapping the Plasma Exposome and its Association with Human Cardiovascular DiseaseR01ES027595 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JAIN, MOHIT · 2017 to 2021
$3.3M
Lipid signaling in cardiac development and diseaseK01HL135464 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI AGUIRRE, AITOR · 2017 to 2021
$795k
RapidFire mass spectrometry systemS10OD020025 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JAIN, MOHIT · 2015 to 2015
$600k
Mapping metabolic activities in stem cell-derived models of human cardiomyopathyR03HL133720 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JAIN, MOHIT · 2016 to 2017
$155k
NHLBI NIH HHS K01 HL135464NHLBI NIH HHS R03 HL133720NIEHS NIH HHS R01 ES027595NIH HHS S10 OD020025
6 · The paper itself

Abstract

Cardiac dysfunctions dramatically increase with age. Revealing a currently unknown contributor to cardiac ageing, we report the age-dependent, cardiac-specific accumulation of the lysosphingolipid sphinganine (dihydrosphingosine, DHS) as an evolutionarily conserved hallmark of the aged vertebrate heart. Mechanistically, the DHS-derivative sphinganine-1-phosphate (DHS1P) directly inhibits HDAC1, causing an aberrant elevation in histone acetylation and transcription levels, leading to DNA damage. Accordingly, the pharmacological interventions, preventing (i) the accumulation of DHS1P using SPHK2 inhibitors, (ii) the aberrant increase in histone acetylation using histone acetyltransferase (HAT) inhibitors, (iii) the DHS1P-dependent increase in transcription using an RNA polymerase II inhibitor, block DHS-induced DNA damage in human cardiomyocytes. Importantly, an increase in DHS levels in the hearts of healthy young adult mice leads to an impairment in cardiac functionality indicated by a significant reduction in left ventricular fractional shortening and ejection fraction, mimicking the functional deterioration of aged hearts. These molecular and functional defects can be partially prevented

Indexed as

Genetic VariationGenomic InstabilityAgingAnimalsCurcuminDNA DamageEnergy MetabolismEpigenesis, GeneticEvolution, MolecularFundulidaeGene Expression ProfilingGene Expression RegulationGenomicsHistone AcetyltransferasesHistone Deacetylase InhibitorsHistonesCurcuminHistone AcetyltransferasesHistone Deacetylase InhibitorsHistonessafingolSphingolipidsSphingosinedihydrosphingosineDNA damagegenomic instabilityhistone modificationtranscription

Identifiers

PMID30886000
PMCPMC6446199
OpenAlexW2921309569

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.