Evidence map›Paper›PMID 30885220›Full record

ArticleMicrobial cell factories2019

Monoterpene production by the carotenogenic yeast Rhodosporidium toruloides.

Xun Zhuang, Oliver Kilian, Eric Monroe, Masakazu Ito, Mary Bao Tran-Gymfi, Fang Liu, Ryan W Davis, Mona Mirsiaghi, Eric Sundstrom, Todd Pray and 3 more

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 96 citations in OpenAlex.

  1. Metabolic Engineering ofJournal of fungi (Basel, Switzerland) · 2026
    Article
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  8. Modularly engineeringFrontiers in bioengineering and biotechnology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Microbial production of advanced biofuels.Nature reviews. Microbiology · 2021
    Review
  15. Article
  16. Review
  17. Biosynthesis of Chlorinated Lactylates inJournal of natural products · 2021
    Article
  18. Engineering the Oleaginous YeastFrontiers in bioengineering and biotechnology · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Xun ZhuangBiomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94551, USA.
Oliver KilianBiomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94551, USA.
Eric MonroeBiomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94551, USA.
Masakazu ItoEnergy Bioscience Institute, 2151 Berkeley Way, Berkeley, CA, 94704, USA.
Mary Bao Tran-GymfiBiomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94551, USA.
Fang LiuBiomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94551, USA.
Ryan W DavisBiomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94551, USA.
Mona MirsiaghiAdvanced Biofuels Process Development Unit (ABPDU), Lawrence Berkeley National Laboratory, 5885 Hollis St, Emeryville, CA, 94608, USA.
Eric SundstromAdvanced Biofuels Process Development Unit (ABPDU), Lawrence Berkeley National Laboratory, 5885 Hollis St, Emeryville, CA, 94608, USA.
Todd PrayAdvanced Biofuels Process Development Unit (ABPDU), Lawrence Berkeley National Laboratory, 5885 Hollis St, Emeryville, CA, 94608, USA.
Jeffrey M SkerkerEnergy Bioscience Institute, 2151 Berkeley Way, Berkeley, CA, 94704, USA.
Anthe GeorgeBiomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94551, USA. ageorge@lbl.gov.
John M GladdenBiomass Science and Conversion Technology, Sandia National Laboratories, 7011 East Ave, Livermore, CA, 94551, USA. jmgladden@lbl.gov.
Sandia National Laboratories California · USLawrence Berkeley National Laboratory · USEnergy Biosciences Institute · USSandia National Laboratories · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDue to their high energy density and compatible physical properties, several monoterpenes have been investigated as potential renewable transportation fuels, either as blendstocks with petroleum or as drop-in replacements for use in vehicles (both heavy and light-weight) or in aviation. Sustainable microbial production of these biofuels requires the ability to utilize cheap and readily available feedstocks such as lignocellulosic biomass, which can be depolymerized into fermentable carbon sources such as glucose and xylose. However, common microbial production platforms such as the yeast Saccharomyces cerevisiae are not naturally capable of utilizing xylose, hence requiring extensive strain engineering and optimization to efficiently utilize lignocellulosic feedstocks. In contrast, the oleaginous red yeast Rhodosporidium toruloides is capable of efficiently metabolizing both xylose and glucose, suggesting that it may be a suitable host for the production of lignocellulosic bioproducts. In addition, R. toruloides naturally produces several carotenoids (C40 terpenoids), indicating that it may have a naturally high carbon flux through its mevalonate (MVA) pathway, providing pools of intermediates for the production of a wide range of heterologous terpene-based biofuels and bioproducts from lignocellulose.

resultsSixteen terpene synthases (TS) originating from plants, bacteria and fungi were evaluated for their ability to produce a total of nine different monoterpenes in R. toruloides. Eight of these TS were functional and produced several different monoterpenes, either as individual compounds or as mixtures, with 1,8-cineole, sabinene, ocimene, pinene, limonene, and carene being produced at the highest levels. The 1,8-cineole synthase HYP3 from Hypoxylon sp. E74060B produced the highest titer of 14.94 ± 1.84 mg/L 1,8-cineole in YPD medium and was selected for further optimization and fuel properties study. Production of 1,8-cineole from lignocellulose was also demonstrated in a 2L batch fermentation, and cineole production titers reached 34.6 mg/L in DMR-EH (Deacetylated, Mechanically Refined, Enzymatically Hydorlized) hydrolysate. Finally, the fuel properties of 1,8-cineole were examined, and indicate that it may be a suitable petroleum blend stock or drop-in replacement fuel for spark ignition engines.

conclusionOur results demonstrate that Rhodosporidium toruloides is a suitable microbial platform for the production of non-native monoterpenes with biofuel applications from lignocellulosic biomass.

Indexed as

BiofuelsBiomassCarotenoidsFermentationLigninMonoterpenesUstilaginalesBiofuelsCarotenoidsLigninlignocelluloseMonoterpenes1,8-CineoleBiofuelMonoterpeneRhodosporidium toruloides

Identifiers

PMID30885220
PMCPMC6421710
OpenAlexW2937027327

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.