Evidence map›Paper›PMID 30884174›Full record

ArticleMicrobiologyOpen2019

Cyclic nucleotides in archaea: Cyclic di-AMP in the archaeon Haloferax volcanii and its putative role.

Frank Braun, Laura Thomalla, Chris van der Does, Tessa E F Quax, Thorsten Allers, Volkhard Kaever, Sonja-Verena Albers

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 46 citations in OpenAlex.

  1. A conserved oscillatory system that positions the divisome in Archaea.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. TrkA ofMicrobiology (Reading, England) · 2025
    Article
  4. Journal of bacteriology · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Bacterial cell volume regulation and the importance of cyclic di-AMP.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  11. Extracellular vesicle formation inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Frank BraunMolecular Biology of Archaea, Institute of Biology, University of Freiburg, Freiburg, Germany.
Laura ThomallaMolecular Biology of Archaea, Institute of Biology, University of Freiburg, Freiburg, Germany.
Chris van der DoesMolecular Biology of Archaea, Institute of Biology, University of Freiburg, Freiburg, Germany.
Tessa E F QuaxMolecular Biology of Archaea, Institute of Biology, University of Freiburg, Freiburg, Germany.ORCID 0000-0001-5516-5871
Thorsten AllersSchool of Life Sciences, Queen's Medical Centre, University of Nottingham, Nottingham, UK.
Volkhard KaeverResearch Core Unit Metabolomics, Hannover Medical School, Hannover, Germany.
Sonja-Verena AlbersMolecular Biology of Archaea, Institute of Biology, University of Freiburg, Freiburg, Germany.ORCID 0000-0003-2459-2226
University of Freiburg · DEMedizinische Hochschule Hannover · DEUniversity of Nottingham · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of cyclic nucleotides as second messengers for intracellular signal transduction has been well described in bacteria. One recently discovered bacterial second messenger is cyclic di-adenylate monophosphate (c-di-AMP), which has been demonstrated to be essential in bacteria. Compared to bacteria, significantly less is known about second messengers in archaea. This study presents the first evidence of in vivo presence of c-di-AMP in an archaeon. The model organism Haloferax volcanii was demonstrated to produce c-di-AMP. Its genome encodes one diadenylate cyclase (DacZ) which was shown to produce c-di-AMP in vitro. Similar to bacteria, the dacZ gene is essential and homologous overexpression of DacZ leads to cell death, suggesting the need for tight regulation of c-di-AMP levels. Such tight regulation often indicates the control of important regulatory processes. A central target of c-di-AMP signaling in bacteria is cellular osmohomeostasis. The results presented here suggest a comparable function in H. volcanii. A strain with decreased c-di-AMP levels exhibited an increased cell area in hypo-salt medium, implying impaired osmoregulation. In summary, this study expands the field of research on c-di-AMP and its physiological function to archaea and indicates that osmoregulation is likely to be a common function of c-di-AMP in bacteria and archaea.

Indexed as

Adenylyl CyclasesDinucleoside PhosphatesGene Expression Regulation, ArchaealGenes, EssentialGenome, BacterialHaloferax volcaniiOsmoregulationSignal TransductionAdenylyl Cyclasescyclic diadenosine phosphateDinucleoside Phosphatesarchaeacyclic di-AMPdiadenylate cyclaseHaloferax volcaniiosmoregulationsecond messenger

Identifiers

PMID30884174
PMCPMC6741144
OpenAlexW2925195098

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.