Evidence map›Paper›PMID 30879203›Full record

ArticleMolecular genetics and genomics : MGG2019

Galactitol catabolism in Sinorhizobium meliloti is dependent on a chromosomally encoded sorbitol dehydrogenase and a pSymB-encoded operon necessary for tagatose catabolism.

MacLean G Kohlmeier, Catherine E White, Jane E Fowler, Turlough M Finan, Ivan J Oresnik

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. International journal of systematic and evolutionary microbiology · 2025
    Article
  3. Activating the d-Tagatose Production Capacity ofJournal of agricultural and food chemistry · 2025
    Article
  4. The transport of mannitol inMicrobiology (Reading, England) · 2023
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

MacLean G KohlmeierDepartment of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada.
Catherine E WhiteDepartment of Biology, McMaster University, Hamilton, ON, Canada.
Jane E FowlerDepartment of Biology, McMaster University, Hamilton, ON, Canada.
Turlough M FinanDepartment of Biology, McMaster University, Hamilton, ON, Canada.
Ivan J OresnikDepartment of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada. Ivan.Oresnik@umanitoba.ca.
McMaster University · CAUniversity of Manitoba · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The legume endosymbiont Sinorhizobium meliloti can utilize a broad range of carbon compounds to support its growth. The linear, six-carbon polyol galactitol is abundant in vascular plants and is metabolized in S. meliloti by the contribution of two loci SMb21372-SMb21377 and SMc01495-SMc01503 which are found on pSymB and the chromosome, respectively. The data suggest that several transport systems, including the chromosomal ATP-binding cassette (ABC) transporter smoEFGK, contribute to the uptake of galactitol, while the adjacent gene smoS encodes a protein for oxidation of galactitol into tagatose. Subsequently, genes SMb21374 and SMb21373, encode proteins that phosphorylate and epimerize tagatose into fructose-6-phosphate, which is further metabolized by the enzymes of the Entner-Doudoroff pathway. Of note, it was found that SMb21373, which was annotated as a 1,6-bis-phospho-aldolase, is homologous to the E. coli gene gatZ, which is annotated as encoding the non-catalytic subunit of a tagatose-1,6-bisphosphate aldolase heterodimer. When either of these genes was introduced into an Agrobacterium tumefaciens strain that carries a tagatose-6-phosphate epimerase mutation, they are capable of complementing the galactitol growth deficiency associated with this mutation, strongly suggesting that these genes are both epimerases. Phylogenetic analysis of the protein family (IPR012062) to which these enzymes belong, suggests that this misannotation is systemic throughout the family. S. meliloti galactitol catabolic mutants do not exhibit symbiotic deficiencies or the inability to compete for nodule occupancy.

Indexed as

ATP-Binding Cassette TransportersBacterial ProteinsChromosomes, BacterialFructose-Bisphosphate AldolaseGalactitolGene Expression Regulation, BacterialHexosesL-Iditol 2-DehydrogenaseOperonPhylogenyPlasmidsSinorhizobium melilotiATP-Binding Cassette TransportersBacterial ProteinsFructose-Bisphosphate AldolaseGalactitolHexosesL-Iditol 2-DehydrogenasetagatoseEpimeraseGalactitolGatZMetabolismRhizobiumTagatose

Identifiers

PMID30879203
OpenAlexW2921586926

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.