Evidence map›Paper›PMID 30877095›Full record

ArticleThe EMBO journal2019

Protein translocation by the SecA ATPase occurs by a power-stroke mechanism.

Marco A Catipovic, Benedikt W Bauer, Joseph J Loparo, Tom A Rapoport

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Structural basis of SecA-mediated protein translocation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Review
  7. Review
  8. AAA+ proteins: one motor, multiple ways to work.Biochemical Society transactions · 2022
    Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. The Dynamic SecYEG Translocon.Frontiers in molecular biosciences · 2021
    Review
  15. Article
  16. Article
  17. Article
  18. The Structure ofInternational journal of molecular sciences · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Marco A CatipovicDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Benedikt W BauerDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Joseph J LoparoDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA.
Tom A RapoportDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA tom_rapoport@hms.harvard.edu.ORCID 0000-0001-9911-4216
Howard Hughes Medical Institute · USHarvard University · US

Funding

MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008313 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MURTHY, VENKATESH N · 1989 to 2023
$14.6M
PROTEIN TRANSPORT INTO MAMMALIAN ENDOPLASMIC RETICULUMR01GM052586 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Tom A Rapoport · 1995 to 2026
$11.9M
Visualizing DNA break repair: single-molecule studies of non-homologous end joiningR01GM115487 · NIGMS · HARVARD MEDICAL SCHOOL · PI LOPARO, JOSEPH J. · 2015 to 2024
$3.1M
NIGMS NIH HHS R01 GM052586NIGMS NIH HHS R01 GM115487NIGMS NIH HHS T32 GM008313
6 · The paper itself

Abstract

SecA belongs to the large class of ATPases that use the energy of ATP hydrolysis to perform mechanical work resulting in protein translocation across membranes, protein degradation, and unfolding. SecA translocates polypeptides through the SecY membrane channel during protein secretion in bacteria, but how it achieves directed peptide movement is unclear. Here, we use single-molecule FRET to derive a model that couples ATP hydrolysis-dependent conformational changes of SecA with protein translocation. Upon ATP binding, the two-helix finger of SecA moves toward the SecY channel, pushing a segment of the polypeptide into the channel. The finger retracts during ATP hydrolysis, while the clamp domain of SecA tightens around the polypeptide, preserving progress of translocation. The clamp opens after phosphate release and allows passive sliding of the polypeptide chain through the SecA-SecY complex until the next ATP binding event. This power-stroke mechanism may be used by other ATPases that move polypeptides.

Indexed as

Adenosine TriphosphateEscherichia coliEscherichia coli ProteinsModels, MolecularPeptidesProtein BindingProtein ConformationProtein TransportSecA ProteinsSEC Translocation ChannelsAdenosine TriphosphateEscherichia coli ProteinsPeptidesSecA protein, E coliSecA ProteinsSEC Translocation ChannelsSecY protein, E coliAAA ATPaseprotein translocationSecASecYsingle‐molecule FRET

Identifiers

PMID30877095
PMCPMC6484406
OpenAlexW2922015044

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.