Evidence map›Paper›PMID 30875396›Full record

ArticlePloS one2019

Automated multi-sample acquisition and analysis using atomic force microscopy for biomedical applications.

Antoine Dujardin, Peter De Wolf, Frank Lafont, Vincent Dupres

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Antoine DujardinCellular Microbiology and Physics of Infection Group-Lille Centre for Infection and Immunity, CNRS UMR8204, INSERM U1019, Lille University Hospital Centre, University of Lille, Institut Pasteur de Lille, Lille, France.
Peter De WolfBruker Nano Surfaces Division, Santa Barbara, California, United States of America.
Frank LafontCellular Microbiology and Physics of Infection Group-Lille Centre for Infection and Immunity, CNRS UMR8204, INSERM U1019, Lille University Hospital Centre, University of Lille, Institut Pasteur de Lille, Lille, France.
Vincent DupresCellular Microbiology and Physics of Infection Group-Lille Centre for Infection and Immunity, CNRS UMR8204, INSERM U1019, Lille University Hospital Centre, University of Lille, Institut Pasteur de Lille, Lille, France.ORCID 0000-0002-1970-3633
Centre National de la Recherche Scientifique · FRBruker (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the last 20 years, atomic force microscopy (AFM) has emerged as a ubiquitous technique in biological research, allowing the analysis of biological samples under near-physiological conditions from single molecules to living cells. Despite its growing use, the low process throughput remains a major drawback. Here, we propose a solution validated on a device allowing a fully automated, multi-sample analysis. Our approach is mainly designed to study samples in fluid and biological cells. As a proof of concept, we demonstrate its feasibility applied to detect and scan both fixed and living bacteria before completion of data processing. The effect of two distinct treatments (i.e. gentamicin and heating) is then evidenced on physical parameters of fixed Yersinia pseudotuberculosis bacteria. The multi-sample analysis presented allows an increase in the number of scanned samples while limiting the user's input. Importantly, cantilever cleaning and control steps are performed regularly-as part of the automated process-to ensure consistent scanning quality. We discuss how such an approach is paving the way to AFM developments in medical and clinical fields, in which statistical significance of results is a prerequisite.

Indexed as

Anti-Bacterial AgentsAutomationGentamicinsHot TemperatureHumansMicroscopy, Atomic ForceNanotechnologyYersinia pseudotuberculosisYersinia pseudotuberculosis InfectionsAnti-Bacterial AgentsGentamicins

Identifiers

PMID30875396
PMCPMC6420161
OpenAlexW2920895396

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.