Evidence map›Paper›PMID 30872727›Full record

ArticleScientific reports2019

Oligoclonal immunoglobulin repertoire in biliary remnants of biliary atresia.

Sarah A Taylor, Padmini Malladi, Xiaomin Pan, Joshua B Wechsler, Kathryn E Hulse, Harris Perlman, Peter F Whitington

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sarah A TaylorDepartment of Pediatrics, Ann and Robert H Lurie Children's Hospital of Chicago, Chicago, Illinois, United States. sataylor@luriechildrens.org.
Padmini MalladiStanley Manne Children's Research Institute, Chicago, Illinois, United States.
Xiaomin PanStanley Manne Children's Research Institute, Chicago, Illinois, United States.
Joshua B WechslerDepartment of Pediatrics, Ann and Robert H Lurie Children's Hospital of Chicago, Chicago, Illinois, United States.
Kathryn E HulseDepartment of Medicine, Northwestern University, Chicago, Illinois, United States.
Harris PerlmanDepartment of Medicine, Northwestern University, Chicago, Illinois, United States.
Peter F WhitingtonDepartment of Pediatrics, Ann and Robert H Lurie Children's Hospital of Chicago, Chicago, Illinois, United States.
Lurie Children's Hospital · USNorthwestern University · US

Funding

Macrophage Cell Subset Specific Biomarkers for Disease Prognosis in Biliary AtresiaU01DK062436 · NIDDK · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI ALONSO, ESTELLA M. · 2002 to 2023
$7.0M
Macrophage Modulation of Lung FibrosisR01HL134375 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PERLMAN, HARRIS R · 2017 to 2020
$2.9M
Regulation of Ulcerative Colitis by mast cells and histamineK08DK097721 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WECHSLER, JOSHUA BRIAN · 2015 to 2019
$792k
NHLBI NIH HHS R01 HL134375NIDDK NIH HHS K08 DK097721NIDDK NIH HHS U01 DK062436
6 · The paper itself

Abstract

Biliary atresia (BA) is a neonatal cholestatic liver disease that is the leading cause of pediatric liver transplantation, however, the mechanism of disease remains unknown. There are two major forms of BA: isolated BA (iBA) comprises the majority of cases and is thought to result from an aberrant immune response to an environmental trigger, whereas syndromic BA (BASM) has associated malformations and is thought to arise from a congenital insult. To determine whether B cells in BA biliary remnants are antigen driven, we examined the immunoglobulin (Ig) repertoire of diseased tissue from each BA group. Deep sequencing of the Ig chain DNA was performed on iBA and BASM biliary remnants and lymph nodes obtained from the Childhood Liver Disease Research Network (ChiLDReN) repository. Statistical analysis of the Ig repertoire provided measures of Ig clonality and the Ig phenotype. Our data demonstrate that B cells infiltrate diseased iBA and BASM biliary remnant tissue. The Ig repertoires of iBA and BASM disease groups were oligoclonal supporting a role for an antigen-driven immune response in both sub-types. These findings shift the current understanding of BA and suggest a role for antigen stimulation in early iBA and BASM disease pathogenesis.

Indexed as

Biliary AtresiaB-LymphocytesChild, PreschoolHigh-Throughput Nucleotide SequencingHumansImmunoglobulinsInfantInfant, NewbornSequence Analysis, DNAImmunoglobulins

Identifiers

PMID30872727
PMCPMC6418100
OpenAlexW2921263310

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.