ArticleScientific reports2019
Analyses of 202 plastid genomes elucidate the phylogeny of Solanum section Petota.
Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
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Who cites it
31 citing papers in PubMed.
- Whole-genome sequencing revealed the genomic origin of Solanum demissum Lindl., a Mexican hexaploid wild potato species.BMC plant biology · 2026Article
- Building genomic resources to facilitate the study and use of Solanum microdontum, a wild relative of cultivated potato.G3 (Bethesda, Md.) · 2026Article
- Better together: Subgenomes for allotetraploid potato wild relative Solanum acaule Bitt. reveal origins in Petota Clade 3 and 4.The plant genome · 2025Article
- Genetic basis for broad interspecific compatibility in Solanum verrucosum.The Plant journal : for cell and molecular biology · 2025Article
- Phylogenetic reconstruction and species delimitation in Stipeae with special reference to Stipa (Poaceae, Pooideae) using mitochondrial genomes.Cladistics : the international journal of the Willi Hennig Society · 2025Article
- A phoenix in the greenhouse: characterization and phylogenomics of complete chloroplast genomes sheds light on the putatively extinct-in-the-wild Solanum ensifolium (Solanaceae).BMC plant biology · 2025Article
- Allotetraploid nature of a wild potato species, Solanum stoloniferum Schlechtd. et Bché., as revealed by whole-genome sequencing.The Plant journal : for cell and molecular biology · 2025Article
- Characterisation of the complete chloroplast genome of Solanum tuberosum cv. White Lady.Biologia futura · 2024Article
- A de novo genome assembly of Solanum bulbocastanum Dun., a Mexican diploid species reproductively isolated from the A-genome species, including cultivated potatoes.G3 (Bethesda, Md.) · 2024Article
- The phased Solanum okadae genome and Petota pangenome analysis of 23 other potato wild relatives and hybrids.Scientific data · 2024Article
- A survey of thePlant direct · 2024Article
- Potato soup: analysis of cultivated potato gene bank populations reveals high diversity and little structure.Frontiers in plant science · 2024Article
- Comparative Study of Plastomes inPlants (Basel, Switzerland) · 2023Article
- Pangenome analyses reveal impact of transposable elements and ploidy on the evolution of potato species.Proceedings of the National Academy of Sciences of the United States of America · 2023Article
- Exploitation of surrogate variables in random forests for unbiased analysis of mutual impact and importance of features.Bioinformatics (Oxford, England) · 2023Article
- Diversity of Late Blight Resistance Genes in the VIR Potato Collection.Plants (Basel, Switzerland) · 2023Article
- Complete Plastome ofGenes · 2022Article
- A de novo genome assembly of Solanum verrucosum Schlechtendal, a Mexican diploid species geographically isolated from other diploid A-genome species of potato relatives.G3 (Bethesda, Md.) · 2022Article
- Potato genomes pave the way to crop improvement.Nature · 2022Article
- Phylogenomic discordance suggests polytomies along the backbone of the large genus Solanum.American journal of botany · 2022Article
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Authors and funding
5 authors.
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Abstract
Our paper analyzes full plastid DNA sequence data of 202 wild and cultivated diploid potatoes, Solanum section Petota, to explore its phylogenetic utility compared to prior analyses of the same accessions using genome-wide nuclear SNPs, and plastid DNA restriction site data. The present plastid analysis discovered the same major clades as the nuclear data but with some substantial differences in topology within the clades. The considerably larger plastid and nuclear data sets add phylogenetic resolution within the prior plastid DNA restriction site data, highlight plastid/nuclear incongruence that supports hypotheses of hybridization/introgression to help explain the taxonomic difficulty in the section.
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