Evidence map›Paper›PMID 30872628›Full record

ArticleScientific reports2019

Combined Tissue-Fluid Proteomics to Unravel Phenotypic Variability in Amyotrophic Lateral Sclerosis.

Emanuela Leoni, Michael Bremang, Vikram Mitra, Irene Zubiri, Stephan Jung, Ching-Hua Lu, Rocco Adiutori, Vittoria Lombardi, Claire Russell, Sasa Koncarevic and 3 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 45 citations in OpenAlex.

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  8. Biomarkers in cerebrospinal fluid for amyotrophic lateral sclerosis phenotypes.Annals of clinical and translational neurology · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Emanuela LeoniProteome Sciences R&D GmbH & Co. KG, Altenhöferallee 3, Frankfurt am Main, 60438, Germany.
Michael BremangProteome Sciences plc, Hamilton House, Mabledon Place, London, WC1H 9BB, UK.
Vikram MitraProteome Sciences plc, Hamilton House, Mabledon Place, London, WC1H 9BB, UK.
Irene ZubiriCentre for Neuroscience and Trauma, Blizard Institute, Queen Mary University of London, 4 Newark Street, London, E1 2AT, UK.
Stephan JungProteome Sciences R&D GmbH & Co. KG, Altenhöferallee 3, Frankfurt am Main, 60438, Germany.
Ching-Hua LuCentre for Neuroscience and Trauma, Blizard Institute, Queen Mary University of London, 4 Newark Street, London, E1 2AT, UK.ORCID http://orcid.org/0000-0002-5191-5089
Rocco AdiutoriCentre for Neuroscience and Trauma, Blizard Institute, Queen Mary University of London, 4 Newark Street, London, E1 2AT, UK.
Vittoria LombardiCentre for Neuroscience and Trauma, Blizard Institute, Queen Mary University of London, 4 Newark Street, London, E1 2AT, UK.
Claire RussellProteome Sciences plc, Hamilton House, Mabledon Place, London, WC1H 9BB, UK.
Sasa KoncarevicProteome Sciences R&D GmbH & Co. KG, Altenhöferallee 3, Frankfurt am Main, 60438, Germany.
Malcolm WardProteome Sciences plc, Hamilton House, Mabledon Place, London, WC1H 9BB, UK.
Ian PikeProteome Sciences plc, Hamilton House, Mabledon Place, London, WC1H 9BB, UK. ian.pike@proteomics.com.
Andrea MalaspinaCentre for Neuroscience and Trauma, Blizard Institute, Queen Mary University of London, 4 Newark Street, London, E1 2AT, UK. a.malaspina@qmul.ac.uk.
Proteome Sciences (United Kingdom) · GBQueen Mary University of London · GB

Funding

Motor Neurone Disease Association MALASPINA/APR13/817-791Motor Neurone Disease Association TURNER/OCT15/972-797Wellcome TrustWellcome Trust 103208
6 · The paper itself

Abstract

The lack of biomarkers for early diagnosis, clinical stratification and to monitor treatment response has hampered the development of new therapies for amyotrophic lateral sclerosis (ALS), a clinically heterogeneous neurodegenerative disorder with a variable site of disease initiation and rate of progression. To identify new biomarkers and therapeutic targets, two separate proteomic workflows were applied to study the immunological response and the plasma/brain proteome in phenotypic variants of ALS. Conventional multiplex (TMT) proteomic analysis of peripheral blood mononuclear cells (PBMCs) was performed alongside a recently introduced method to profile neuronal-derived proteins in plasma using brain tissue-enhanced isobaric tagging (TMTcalibrator). The combined proteomic analysis allowed the detection of regulated proteins linked to ALS pathogenesis (RNA-binding protein FUS, superoxide dismutase Cu-Zn and neurofilaments light polypeptide) alongside newly identified candidate biomarkers (myosin-9, fructose-bisphosphate aldolase and plectin). In line with the proteomic results, orthogonal immunodetection showed changes in neurofilaments and ApoE in bulbar versus limb onset fast progressing ALS. Functional analysis of significantly regulated features showed enrichment of pathways involved in regulation of the immune response, Rho family GTPases, semaphorin and integrin signalling. Our cross-phenotype investigation of PBMCs and plasma/brain proteins provides a more sensitive biomarker exploratory platform than conventional case-control studies in a single matrix. The reported regulated proteins may represent novel biomarker candidates and potentially druggable targets.

Indexed as

AdultAgedAged, 80 and overAmyotrophic Lateral SclerosisApolipoproteins EBiomarkersCase-Control StudiesEarly DiagnosisFemaleHumansIntermediate FilamentsMaleMiddle AgedPhenotypePrincipal Component AnalysisProteomicsApoE protein, humanApolipoproteins EBiomarkers

Identifiers

PMID30872628
PMCPMC6418138
OpenAlexW2920976911

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.