Evidence map›Paper›PMID 30868993›Full record

ArticleEpidemiology and infection2019

Molecular detection of rabies virus strain with N-gene that clustered with China lineage 2 co-circulating with Africa lineages in Monrovia, Liberia: first reported case in Africa.

A O Olarinmoye, V Kamara, N D Jomah, B O Olugasa, O O Ishola, A Kamara, P D Luka

Open access · hybridAbstract read
In one paragraph

Article in Epidemiology and infection, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 6 countries.

A O OlarinmoyeEng. Abdullah Bugshan Research Chair for Dental and Oral Rehabilitation (D.O.R), College of Dentistry,King Saud University,Riyadh,Kingdom of Saudi Arabia.ORCID 0000-0001-8285-0858
V KamaraMinistry of Agriculture,Leon Quest Ledlum Central Veterinary Diagnostic Laboratory,Fendel,Monrovia,Liberia.
N D JomahCentral Agricultural Research Institute (C.A.R.I.),Suakoko,Bong County,Liberia.
B O OlugasaCenter for Control and Prevention of Zoonoses,Faculty of Veterinary Medicine,University of Ibadan,Ibadan,Nigeria.
O O IsholaCenter for Control and Prevention of Zoonoses,Faculty of Veterinary Medicine,University of Ibadan,Ibadan,Nigeria.
A KamaraMinistry of Agriculture Sub-office,Buchanan,Grand Bassa County,Liberia.
P D LukaNational Veterinary Research Institute (N.V.R.I.),Vom, Plateau State,Nigeria.
University of Ibadan · NGUniversity of Liberia · LRLiberian Institute for Biomedical Research · LRNational Veterinary Research Institute · NG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite a long history of dog-transmitted human rabies outbreaks in Liberia, West Africa, no reports exist of molecular characterisation of the causative lyssaviruses. This study investigated Rabies lyssavirus (RABV) strains isolated at the dog-human interface in Monrovia, Liberia 2016 and 2017, by reverse transcription polymerase chain reaction, using primers specific for the nucleoprotein (N) gene. Out of 20 specimens (19 dog brain samples and one human saliva) tested as suspected rabies cases, three (15%) were positive. Purified amplicons from all three positive specimens were sequenced in both forward and reverse directions. Phylogenetic analysis was conducted in MEGA7 and PhyML3 to determine their relationship with RABV sequences accessioned in NCBI GenBank. The first of three RABV strains detected clustered with China lineage 2 RABVs of dogs (99% homology to KU963489 and DQ666322). The second strain segregated with Africa lineage 2 RABVs also of dog origin, and the third strain segregated with Africa lineage 3 RABVs of Southern Africa viverrids. Our results show a transcontinental strain of rabies virus co-circulating with Africa lineages in post-conflict Liberia. This finding should stimulate more effective sub-regional planning and execution of one-health actions, towards stepwise surveillance and elimination of rabies in West Africa by 2030.

Indexed as

AnimalsDog DiseasesDogsHumansLiberiaMolecular EpidemiologyPhylogenyRabiesRabies virusLiberiaMonroviaRabies (canine)RT-PCRsequencing analysis

Identifiers

PMID30868993
PMCPMC6518606
OpenAlexW2916619678

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.