Evidence map›Paper›PMID 30868544›Full record

ArticlePlant molecular biology2019

Functional and molecular characterization of the conserved Arabidopsis PUMILIO protein, APUM9.

Tünde Nyikó, Andor Auber, Etienne Bucher

Open access · hybridAbstract read
In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Natural variation inScience advances · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Comprehensive Identification of theInternational journal of molecular sciences · 2023
    Article
  9. Review
  10. Review
  11. Emerging Roles of RNA-Binding Proteins in Seed Development and Performance.International journal of molecular sciences · 2020
    Review
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Tünde NyikóUniversité d'Angers, UMR1345 Institut de Recherche en Horticulture et Semences (IRHS-INRA), 42 rue Georges Morel, 24, 49071, Beaucouzé, France.
Andor AuberAgricultural Biotechnology Institute, Szent-Györgyi Albert 4, Gödöllő, 2100, Hungary.
Etienne BucherUniversité d'Angers, UMR1345 Institut de Recherche en Horticulture et Semences (IRHS-INRA), 42 rue Georges Morel, 24, 49071, Beaucouzé, France. etienne.bucher@inra.fr.
Agricultural Biotechnology Institute · HUInstitut de recherche en horticulture et semences · FRUniversité d'Angers · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageHere we demonstrate that the APUM9 RNA-binding protein and its co-factors play a role in mRNA destabilization and how this activity might regulate early plant development. APUM9 is a conserved PUF RNA-binding protein (RBP) under complex transcriptional control mediated by a transposable element (TE) that restricts its expression in Arabidopsis. Currently, little is known about the functional and mechanistic details of the plant PUF regulatory system and the biological relevance of the TE-mediated repression of APUM9 in plant development and stress responses. By combining a range of transient assays, we show here, that APUM9 binding to target transcripts can trigger their rapid decay via its conserved C-terminal RNA-binding domain. APUM9 directly interacts with DCP2, the catalytic subunit of the decapping complex and DCP2 overexpression induces rapid decay of APUM9 targeted mRNAs. We show that APUM9 negatively regulates the expression of ABA signaling genes during seed imbibition, and thereby might contribute to the switch from dormant stage to seed germination. By contrast, strong TE-mediated repression of APUM9 is important for normal plant growth in the later developmental stages. Finally, APUM9 overexpression plants show slightly enhanced heat tolerance suggesting that TE-mediated control of APUM9, might have a role not only in embryonic development, but also in plant adaptation to heat stress conditions.

Indexed as

Conserved SequenceAdaptation, PhysiologicalArabidopsisArabidopsis ProteinsCatalytic DomainDNA Transposable ElementsPlant DevelopmentPlant DormancyProtein BindingProtein DomainsRNA-Binding ProteinsRNA, MessengerRNA StabilitySeedsStress, PhysiologicalAPUM9 protein, ArabidopsisArabidopsis ProteinsDNA Transposable ElementsRNA-Binding ProteinsRNA, MessengerABAAPUM9Plant development and heat tolerancePUMILIO/PUF proteinRNA-binding proteinTransposable element

Identifiers

PMID30868544
PMCPMC6513901
OpenAlexW2921929514

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.