Evidence map›Paper›PMID 30867996›Full record

ArticlePeerJ2019

Patterns of hepatitis B virus

Nidaa A Ababneh, Malik Sallam, Doaa Kaddomi, Abdelrahman M Attili, Isam Bsisu, Nadia Khamees, Amer Khatib, Azmi Mahafzah

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
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  5. Detection of circulating hepatitis B virus immune escape and polymerase mutants among HBV-positive patients attending Institut Pasteur de Bangui, Central African Republic.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Nidaa A Ababneh *Cell Therapy Center (CTC), University of Jordan, Amman, Jordan.
Malik Sallam *Department of Pathology, Microbiology and Forensic Medicine, School of Medicine, University of Jordan, Amman, Jordan.ORCID 0000-0002-0165-9670
Doaa KaddomiGastroenterology and Liver Division, Department of Internal Medicine, Jordan University Hospital, Amman, Jordan.
Abdelrahman M AttiliSchool of Medicine, University of Jordan, Amman, Jordan.
Isam BsisuSchool of Medicine, University of Jordan, Amman, Jordan.ORCID 0000-0002-8999-8334
Nadia KhameesGastroenterology and Liver Division, Department of Internal Medicine, Jordan University Hospital, Amman, Jordan.
Amer KhatibGastroenterology and Liver Division, Department of Internal Medicine, Jordan University Hospital, Amman, Jordan.
Azmi MahafzahDepartment of Pathology, Microbiology and Forensic Medicine, School of Medicine, University of Jordan, Amman, Jordan.
University of Jordan · JOJordan Hospital · JO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis B virus (HBV) is an important infectious cause of morbidity and mortality in Jordan. HBV genotype D is the most prevalent in the country. Virus escape mutants in the HBV

methodsPatients infected with HBV were recruited at Jordan University Hospital (

resultsGenotyping revealed an exclusive presence of sub-genotype D1. Typical HBV escape mutants were identified in seven patients. These mutations included: L109R, Q129R, M133L, S143L and D144E with overall prevalence of 18.9% (95% CI [9.5-34.2]). Reverse transcriptase (RT) sequence analysis showed mutations in three patients with overall prevalence of 8.1% (95% CI [2.8-21.3]). RT mutations included: V173L, S202I, L180M, M204V and T184A. Transmission cluster analysis revealed a relatively high proportion of infections taking place as a result of domestic spread (29.7%).

conclusionsBased on our findings, RT mutation analysis appears to be of high value before the initiation of therapy in patients with chronic HBV infection in Jordan. Phylogenetic analyses revealed a considerable proportion of local spread in the country which should be considered in the preventive infection control efforts.

Indexed as

EpidemiologyHBVHepatitis BMutationPhylogeny

Identifiers

PMID30867996
PMCPMC6410685
OpenAlexW2922370149

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.