Evidence map›Paper›PMID 30867594›Full record

ArticleNature2019

Histone serotonylation is a permissive modification that enhances TFIID binding to H3K4me3.

Lorna A Farrelly, Robert E Thompson, Shuai Zhao, Ashley E Lepack, Yang Lyu, Natarajan V Bhanu, Baichao Zhang, Yong-Hwee E Loh, Aarthi Ramakrishnan, Krishna C Vadodaria and 17 more

Abstract read
In one paragraph

Article in Nature, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 290 papers.

0numbers the graph read from it
0cells of the map it votes in
290citing papers in PubMed
18.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

290 citing papers in PubMed, 453 citations in OpenAlex.

  1. Review
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  13. Linking cellular metabolism to chromatin modifications in plants.Journal of integrative plant biology · 2026
    Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article

230 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 9 institutions in 3 countries.

Lorna A FarrellyFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Robert E ThompsonDepartment of Chemistry, Princeton University, Princeton, NJ, USA.
Shuai ZhaoBeijing Advanced Innovation Center for Structural Biology, MOE Key Laboratory of Protein Sciences, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, China.
Ashley E LepackFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Yang LyuFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Natarajan V BhanuEpigenetics Institute, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Baichao ZhangBeijing Advanced Innovation Center for Structural Biology, MOE Key Laboratory of Protein Sciences, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, China.
Yong-Hwee E LohFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Aarthi RamakrishnanFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Krishna C VadodariaLaboratory of Genetics, The Salk Institute for Biological Sciences, La Jolla, CA, USA.
Kelly J HeardLaboratory of Genetics, The Salk Institute for Biological Sciences, La Jolla, CA, USA.
Galina EriksonLaboratory of Genetics, The Salk Institute for Biological Sciences, La Jolla, CA, USA.
Tomoyoshi NakadaiLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY, USA.
Ryan M BastleFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Bradley J LukasakDepartment of Chemistry, Princeton University, Princeton, NJ, USA.
Henry ZebroskiThe Rockefeller University Proteomics Resource Center, The Rockefeller University, New York, NY, USA.
Natalia AleninaMax-Delbrück-Center for Molecular Medicine (MDC), Berlin, Germany.
Michael BaderMax-Delbrück-Center for Molecular Medicine (MDC), Berlin, Germany.
Olivier BertonFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Robert G RoederLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY, USA.
Henrik MolinaThe Rockefeller University Proteomics Resource Center, The Rockefeller University, New York, NY, USA.
Fred H GageLaboratory of Genetics, The Salk Institute for Biological Sciences, La Jolla, CA, USA.
Li ShenFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Benjamin A GarciaEpigenetics Institute, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Haitao LiBeijing Advanced Innovation Center for Structural Biology, MOE Key Laboratory of Protein Sciences, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, China.
Tom W MuirDepartment of Chemistry, Princeton University, Princeton, NJ, USA.
Ian MazeFishberg Department of Neuroscience, Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. ian.maze@mssm.edu.
Allen Institute for Brain Science · USIcahn School of Medicine at Mount Sinai · USRockefeller University · USSalk Institute for Biological Studies · USPrinceton University · USMax Delbrück Center · DETsinghua University · CNUniversity of Pennsylvania · USCenter for Life Sciences · CN

Funding

REPRESSIVE HISTONE AND DNA METHYLATION IN RODENT DEPRESSION MODELSP50MH096890 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ALLIS, CHARLES DAVID · 2012 to 2021
$20.2M
Shared Resources Core 2: Quantitative Proteomics CoreP01CA196539 · NCI · ROCKEFELLER UNIVERSITY · PI MUIR, TOM · 2015 to 2024
$17.6M
Structure, Function and Applications of InteinsR37GM086868 · NIGMS · PRINCETON UNIVERSITY · PI MUIR, TOM · 2012 to 2021
$5.4M
T32 Translational Addiction Research Fellowship ProgramT32DA028874 · NIDA · UNIVERSITY OF PENNSYLVANIA · PI Julie A Blendy, Anna Rose Childress · 2010 to 2026
$5.0M
TRAINING IN PHARMACOLOGY OF DRUGS OF ABUSET32DA007135 · NIDA · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI DEVI, LAKSHMI A · 1985 to 2018
$4.9M
Molecular studies of neural histone monoaminylation in normal and aberrant brain plasticityR01MH116900 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Ian S. Maze · 2019 to 2026
$4.7M
Mechanisms of p53 target gene activation in DNA damage responsesR01CA129325 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2007 to 2011
$4.0M
Functional and Mechanistic Study of Histone Crotonylation in Hematological MalignanciesR01CA204639 · NCI · ROCKEFELLER UNIVERSITY · PI ALLIS, CHARLES DAVID, ARMSTRONG, SCOTT A · 2016 to 2020
$3.5M
Roles for histone monoaminylation in cocaine-induced transcriptional and behavioral plasticityDP1DA042078 · NIDA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MAZE, IAN S. · 2016 to 2021
$3.2M
Understanding the Role of Combinatorial Histone PTM PatternsR01GM110174 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GARCIA, BENJAMIN A · 2014 to 2017
$1.3M
Application of intein-based chemical methods to directly manipulate neuronal histone modifications in rodent models of addictionR21DA044767 · NIDA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DAVID-SHTERNBERG, YAEL E, MAZE, IAN S. · 2018 to 2019
$444k
Cocaine-induced histone post-translational modificationsR21DA040837 · NIDA · UNIVERSITY OF PENNSYLVANIA · PI GARCIA, BENJAMIN A, PIERCE, ROBERT CHRISTOPHER · 2016 to 2017
$440k
NCI NIH HHS P01 CA196539NCI NIH HHS R01 CA129325NCI NIH HHS R01 CA204639NIDA NIH HHS DP1 DA042078NIDA NIH HHS R21 DA040837NIDA NIH HHS R21 DA044767NIDA NIH HHS T32 DA007135NIDA NIH HHS T32 DA028874NIGMS NIH HHS R01 GM110174NIGMS NIH HHS R37 GM086868NIMH NIH HHS P50 MH096890NIMH NIH HHS R01 MH116900
6 · The paper itself

Abstract

Chemical modifications of histones can mediate diverse DNA-templated processes, including gene transcription

Indexed as

Gene Expression RegulationProtein Processing, Post-TranslationalAnimalsCell DifferentiationCell LineFemaleGlutamineGTP-Binding ProteinsHistonesHumansLysineMethylationMiceMice, Inbred C57BLProtein BindingProtein Glutamine gamma Glutamyltransferase 2GlutamineGTP-Binding Proteinshistone H3 trimethyl Lys4HistonesLysineProtein Glutamine gamma Glutamyltransferase 2SerotoninTGM2 protein, humanTranscription Factor TFIIDTransglutaminases

Identifiers

PMID30867594
PMCPMC6557285
OpenAlexW2922441457

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.