Evidence map›Paper›PMID 30866829›Full record

ArticleBMC plant biology2019

Comprehensive analysis of dynamic gene expression and investigation of the roles of hydrogen peroxide during adventitious rooting in poplar.

Yan Zhang, Zheng'ang Xiao, Chang Zhan, Meifeng Liu, Wenxiu Xia, Nian Wang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
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  5. Article
  6. Article
  7. Article
  8. Comparative transcriptomic analysis uncovers conserved pathways involved in adventitious root formation in poplar.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  9. Adventitious Rooting inFrontiers in plant science · 2021
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Microcutting Redox Profile and Anatomy inFrontiers in plant science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yan ZhangCollege of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Zheng'ang XiaoCollege of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Chang ZhanCollege of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Meifeng LiuCollege of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Wenxiu XiaCollege of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Nian WangCollege of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China. wangn@mail.hzau.edu.cn.ORCID http://orcid.org/0000-0001-9185-4199
Huazhong Agricultural University · CN

Funding

National Natural Science Foundation of China 31670651
6 · The paper itself

Abstract

backgroundAdventitious roots (ARs) are roots that are generated from nonrooting tissues. ARs are usually produced both during normal development and in response to stress conditions, such as flooding, nutrient deprivation, heavy metal stress and wounding. The ability of plants to form ARs is a key trait that enables plant propagation, especially for most tree species.

resultsHere, the kinetics of AR formation in a tissue culture of a hybrid variety of poplar were investigated. AR formation mainly occurred during the first 8 days and both pre- and newly- formed primordia contributed to AR formation in poplar by histological study. RNA-Seq-based transcriptome analysis was performed for stem bases collected at 0, 2, 4, 6 and 8 days after excision (DAE). Based on the data, the expression patterns of 8 phytohormone-related genes were investigated, and their influences on AR formation were considered. Subsequent gene expression cluster analysis showed a number of biological processes involved in AR formation. Among these biological pathways, genes involved in H

conclusionsBased on the results of this study, we were able to predict a regulatory network for 7 phytohormones that are involved in poplar AR formation. The influence of H

Indexed as

Gene Regulatory NetworksTranscriptomeHydrogen PeroxidePlant Growth RegulatorsPlant RootsPopulusHydrogen PeroxidePlant Growth RegulatorsAdventitious rootingGene expressionHydrogen peroxidePhytohormonePoplar

Identifiers

PMID30866829
PMCPMC6416884
OpenAlexW2941454345

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.