Evidence map›Paper›PMID 30866817›Full record

ArticleBMC plant biology2019

Confirmation of Fusarium root rot resistance QTL Fsp-Ps 2.1 of pea under controlled conditions.

Clarice J Coyne, Lyndon D Porter, Gilles Boutet, Yu Ma, Rebecca J McGee, Angélique Lesné, Alain Baranger, Marie-Laure Pilet-Nayel

Abstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

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0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Seeds Priming with Bio-Silver Nanoparticles Protects Pea (International journal of molecular sciences · 2024
    Article
  6. Article
  7. The Host Range ofPathogens (Basel, Switzerland) · 2024
    Article
  8. Antifungal Properties of Bio-AgNPs againstInternational journal of molecular sciences · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Identification ofFrontiers in genetics · 2020
    Article
  19. Article
  20. Inheritance and Quantitative Trait Locus Mapping ofFrontiers in plant science · 2019
    Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

8 authors.

Clarice J CoyneUSDA-ARS Plant Germplasm Introduction & Testing Research, Washington State University, Pullman, WA, 99164, USA. clarice.coyne@ars.usda.gov.ORCID http://orcid.org/0000-0003-1374-4618
Lyndon D PorterUSDA-ARS Grain Legume Genetics & Physiology Research, 24106 N. Bunn Road, Prosser, WA, 99350, USA.
Gilles BoutetInstitut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université Rennes 1, 35650, Le Rheu, France.
Yu MaDepartment of Horticulture, Washington State University, Pullman, WA, 99164, USA.
Rebecca J McGeeUSDA-ARS, Grain Legume Genetics & Physiology Research, Pullman, WA, 99164, USA.
Angélique LesnéInstitut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université Rennes 1, 35650, Le Rheu, France.
Alain BarangerInstitut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université Rennes 1, 35650, Le Rheu, France.
Marie-Laure Pilet-NayelInstitut de Génétique, Environnement et Protection des Plantes, INRA, Agrocampus Ouest, Université Rennes 1, 35650, Le Rheu, France.

Funding

Agricultural Research Service 5348 21000-024-00DAgricultural Research Service 5348-21000-026-00DFrench FASO PEAPOL
6 · The paper itself

Abstract

backgroundDry pea production has increased substantially in North America over the last few decades. With this expansion, significant yield losses have been attributed to an escalation in Fusarium root rots in pea fields. Among the most significant rot rotting pathogenic fungal species, Fusarium solani fsp. pisi (Fsp) is one of the main causal agents of root rot of pea. High levels of partial resistance to Fsp has been identified in plant genetic resources. Genetic resistance offers one of the best solutions to control this root rotting fungus. A recombinant inbred population segregating for high levels of partial resistance, previously single nucleotide polymorphism (SNP) genotyped using genotyping-by-sequencing, was phenotyped for disease reaction in replicated and repeated greenhouse trials. Composite interval mapping was deployed to identify resistance-associated quantitative trait loci (QTL).

resultsThree QTL were identified using three disease reaction criteria: root disease severity, ratios of diseased vs. healthy shoot heights and dry plant weights under controlled conditions using pure cultures of Fusarium solani fsp. pisi. One QTL Fsp-Ps 2.1 explains 44.4-53.4% of the variance with a narrow confidence interval of 1.2 cM. The second and third QTL Fsp-Ps3.2 and Fsp-Ps3.3 are closely linked and explain only 3.6-4.6% of the variance. All of the alleles are contributed by the resistant parent PI 180693.

conclusionWith the confirmation of Fsp-Ps 2.1 now in two RIL populations, SNPs associated with this region make a good target for marker-assisted selection in pea breeding programs to obtain high levels of partial resistance to Fusarium root rot caused by Fusarium solani fsp. pisi.

Indexed as

AllelesDisease ResistanceFusariumGenotypePhenotypePisum sativumPlant BreedingPlant DiseasesPolymorphism, Single NucleotideQuantitative Trait LociFusarium solani fsp. pisiPisum sativum L.Quantitative trait loci

Identifiers

PMID30866817
PMCPMC6417171

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.