Evidence map›Paper›PMID 30866816›Full record

ArticleBMC genomics2019

Acting locally - affecting globally: RNA sequencing of gilthead sea bream with a mild Sparicotyle chrysophrii infection reveals effects on apoptosis, immune and hypoxia related genes.

M Carla Piazzon, Ivona Mladineo, Fernando Naya-Català, Ron P Dirks, Susanne Jong-Raadsen, Anamarija Vrbatović, Jerko Hrabar, Jaume Pérez-Sánchez, Ariadna Sitjà-Bobadilla

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. New data on the presence ofHelminthologia · 2025
    Article
  3. Article
  4. Article
  5. The Expansion of Sirtuin Gene Family in Gilthead Sea Bream (International journal of molecular sciences · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Infection by the ParasiteMicroorganisms · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Frontiers in immunology · 2021
    Article
  14. Article
  15. Host-Parasite Interaction between Parasitic CymothoidPathogens (Basel, Switzerland) · 2020
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

M Carla PiazzonFish Pathology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Ribera de Cabanes, Castellón, Spain. carla.piazzon@csic.es.ORCID http://orcid.org/0000-0002-4949-8984
Ivona MladineoInstitute of Oceanography and Fisheries, Split, Croatia.
Fernando Naya-CatalàNutrigenomics and Fish Growth Endocrinology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Ribera de Cabanes, Castellón, Spain.
Ron P DirksFuture Genomics Technology, Leiden, The Netherlands.
Susanne Jong-RaadsenFuture Genomics Technology, Leiden, The Netherlands.
Anamarija VrbatovićInstitute of Oceanography and Fisheries, Split, Croatia.
Jerko HrabarInstitute of Oceanography and Fisheries, Split, Croatia.
Jaume Pérez-SánchezNutrigenomics and Fish Growth Endocrinology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Ribera de Cabanes, Castellón, Spain.
Ariadna Sitjà-BobadillaFish Pathology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), Ribera de Cabanes, Castellón, Spain.
Institute of Oceanography and Fisheries · HRInstituto de Acuicultura Torre de la Sal · ESParc Científic de la Universitat de València · ES

Funding

Consejo Superior de Investigaciones Científicas PIE. 201740E013H2020 Societal Challenges 634429
6 · The paper itself

Abstract

backgroundMonogenean flatworms are the main fish ectoparasites inflicting serious economic losses in aquaculture. The polyopisthocotylean Sparicotyle chrysophrii parasitizes the gills of gilthead sea bream (GSB, Sparus aurata) causing anaemia, lamellae fusion and sloughing of epithelial cells, with the consequent hypoxia, emaciation, lethargy and mortality. Currently no preventive or curative measures against this disease exist and therefore information on the host-parasite interaction is crucial to find mitigation solutions for sparicotylosis. The knowledge about gene regulation in monogenean-host models mostly comes from freshwater monopysthocotyleans and almost nothing is known about polyopisthocotyleans. The current study aims to decipher the host response at local (gills) and systemic (spleen, liver) levels in farmed GSB with a mild natural S. chrysophrii infection by transcriptomic analysis.

resultsUsing Illumina RNA sequencing and transcriptomic analysis, a total of 2581 differentially expressed transcripts were identified in infected fish when compared to uninfected controls. Gill tissues in contact with the parasite (P gills) displayed regulation of fewer genes (700) than gill portions not in contact with the parasite (NP gills) (1235), most likely due to a local silencing effect of the parasite. The systemic reaction in the spleen was much higher than that at the parasite attachment site (local) (1240), and higher than in liver (334). NP gills displayed a strong enrichment of genes mainly related to immune response and apoptosis. Processes such as apoptosis, inflammation and cell proliferation dominated gills, whereas inhibition of apoptosis, autophagy, platelet activation, signalling and aggregation, and inflammasome were observed in spleen. Proteasome markers were increased in all tissues, whereas hypoxia-related genes were down-regulated in gills and spleen.

conclusionsContrasting forces seem to be acting at local and systemic levels. The splenic down-regulation could be part of a hypometabolic response, to counteract the hypoxia induced by the parasite damage to the gills and to concentrate the energy on defence and repair responses. Alternatively, it can be also interpreted as the often observed action of helminths to modify host immunity in its own interest. These results provide the first toolkit for future studies towards understanding and management of this parasitosis.

Indexed as

AnimalsAutophagyCell ProliferationFisheriesFish ProteinsGene Expression ProfilingGene Expression RegulationGillsHelminthiasis, AnimalHigh-Throughput Nucleotide SequencingHost-Parasite InteractionsLiverPlatyhelminthsSea BreamSequence Analysis, RNASpleenFish ProteinsApoptosisEctoparasitesGillsIllumina RNA-seqImmune responseMonogeneaSparicotyle chrysophriiSparus aurataTranscriptomics

Identifiers

PMID30866816
PMCPMC6416957
OpenAlexW2922780770

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.