Evidence map›Paper›PMID 30866767›Full record

ArticleEmerging microbes & infections2019

Detection of human parvovirus 4 DNA in the patients with acute encephalitis syndrome during seasonal outbreaks of the disease in Gorakhpur, India.

Vidya A Arankalle, Navin Srivastava, Komal P Kushwaha, Agnibha Sen, Ashwini Y Ramdasi, Priyanka A Patel, Sumeet Kuthe, Bangari Haldipur, Gajanan N Sakpal, Kavita S Lole and 1 more

Abstract read
In one paragraph

Article in Emerging microbes & infections, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Central Nervous System Manifestations Associated with COVID-19.Current neurology and neuroscience reports · 2020
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Vidya A Arankallea National Institute of Virology, Microbial Containment Complex , Pune , India.
Navin Srivastavaa National Institute of Virology, Microbial Containment Complex , Pune , India.
Komal P Kushwahac Baba Raghav Das Medical College , Gorakhpur , India.
Agnibha Sena National Institute of Virology, Microbial Containment Complex , Pune , India.
Ashwini Y Ramdasia National Institute of Virology, Microbial Containment Complex , Pune , India.
Priyanka A Patela National Institute of Virology, Microbial Containment Complex , Pune , India.
Sumeet Kuthea National Institute of Virology, Microbial Containment Complex , Pune , India.
Bangari Haldipura National Institute of Virology, Microbial Containment Complex , Pune , India.
Gajanan N Sakpala National Institute of Virology, Microbial Containment Complex , Pune , India.
Kavita S Lolea National Institute of Virology, Microbial Containment Complex , Pune , India.
Nilesh B Inglea National Institute of Virology, Microbial Containment Complex , Pune , India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seasonal outbreaks of acute encephalitis syndrome (AES) at Gorakhpur, India have been recognized since 2006. So far, the causative agent has not been identified. Use of next generation sequencing identified human parvovirus 4 (HPARV4) sequences in a CSF/plasma pool. These sequences showed highest identity with sequences earlier identified in similar patients from south India. Real-time PCR detected HPARV4 DNA in 20/78 (25.6%) CSF and 6/31 (19.3%) plasma of AES patients. Phylogenetic analysis classified three almost complete genomes and 24 partial NS1 sequences as genotype 2A. The observed association of HPARV4 with AES needs further evaluation. ELISAs for the detection of IgM and IgG antibodies against scrub typhus (Orientia tsutsugamushi, OT) showed ∼70% IgM/IgG positivity suggestive of etiologic association. Prospective, comprehensive studies are needed to confirm association of these agents, singly or in combination with AES in Gorakhpur region.

Indexed as

Disease OutbreaksAcute Febrile EncephalopathyChildChild, PreschoolDNA, ViralFemaleHigh-Throughput Nucleotide SequencingHumansImmunoglobulin GImmunoglobulin MIndiaInfantMaleParvoviridae InfectionsParvovirusPhylogenyDNA, ViralImmunoglobulin GImmunoglobulin Macute encephalitis syndromeGorakhpurHPARV4NGSphylogenetic analysis

Identifiers

PMID30866767
PMCPMC6455185

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.