Evidence map›Paper›PMID 30866487›Full record

ArticleInternational journal of molecular sciences2019

A novel Microproteomic Approach Using Laser Capture Microdissection to Study Cellular Protrusions.

Karine Gousset, Ana Gordon, Shravan Kumar Kannan, Joey Tovar

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Building the bridges: molecular mechanisms of tunneling nanotube formation.Cellular and molecular life sciences : CMLS · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Laser Application in Life Sciences.International journal of molecular sciences · 2023
    Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Karine GoussetBiology Department, California State University Fresno, 2555 East San Ramon Ave M/S SB73, Fresno, CA 93740, USA. kgousset@csufresno.edu.ORCID 0000-0002-0988-2332
Ana GordonBiology Department, California State University Fresno, 2555 East San Ramon Ave M/S SB73, Fresno, CA 93740, USA. anagordonbc@gmail.com.
Shravan Kumar KannanBiology Department, California State University Fresno, 2555 East San Ramon Ave M/S SB73, Fresno, CA 93740, USA. shra1kumr@mail.fresnostate.edu.
Joey TovarBiology Department, California State University Fresno, 2555 East San Ramon Ave M/S SB73, Fresno, CA 93740, USA. jtovar@rocketmail.com.
California State University, Fresno · US

Funding

Microproteomic analysis of laser capture microdissected cells forming TNTsSC2GM111144 · NIGMS · CALIFORNIA STATE UNIVERSITY FRESNO · PI GOUSSET, KARINE · 2014 to 2016
$420k
2014 CSUPERB New Investigator Grant N/AFundación Alfonso Martín Escudero N/ANational Institute of General Medical Sciences SC2GM111144NIGMS NIH HHS SC2 GM111144
6 · The paper itself

Abstract

Cell⁻cell communication is vital to multicellular organisms, and distinct types of cellular protrusions play critical roles during development, cell signaling, and the spreading of pathogens and cancer. The differences in the structure and protein composition of these different types of protrusions and their specific functions have not been elucidated due to the lack of a method for their specific isolation and analysis. In this paper, we described, for the first time, a method to specifically isolate distinct protrusion subtypes, based on their morphological structures or fluorescent markers, using laser capture microdissection (LCM). Combined with a unique fixation and protein extraction protocol, we pushed the limits of microproteomics and demonstrate that proteins from LCM-isolated protrusions can successfully and reproducibly be identified by mass spectrometry using ultra-high field Orbitrap technologies. Our method confirmed that different types of protrusions have distinct proteomes and it promises to advance the characterization and the understanding of these unique structures to shed light on their possible role in health and disease.

Indexed as

Cell CommunicationCells, CulturedCell Surface ExtensionsHumansLaser Capture MicrodissectionMass SpectrometryMicroscopyMolecular Sequence AnnotationProteomicscellular protrusionsLaser Capture microdissectionmicroproteomics

Identifiers

PMID30866487
PMCPMC6429397
OpenAlexW2919304527

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.