Evidence map›Paper›PMID 30865716›Full record

ArticlePloS one2019

Convolutional neural network for cell classification using microscope images of intracellular actin networks.

Ronald Wihal Oei, Guanqun Hou, Fuhai Liu, Jin Zhong, Jiewen Zhang, Zhaoyi An, Luping Xu, Yujiu Yang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
11.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 73 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ronald Wihal OeiOpen FIESTA Center, Tsinghua University, Shenzhen, P.R. China.
Guanqun HouOpen FIESTA Center, Tsinghua University, Shenzhen, P.R. China.
Fuhai LiuOpen FIESTA Center, Tsinghua University, Shenzhen, P.R. China.
Jin ZhongOpen FIESTA Center, Tsinghua University, Shenzhen, P.R. China.
Jiewen ZhangOpen FIESTA Center, Tsinghua University, Shenzhen, P.R. China.
Zhaoyi AnOpen FIESTA Center, Tsinghua University, Shenzhen, P.R. China.
Luping XuOpen FIESTA Center, Tsinghua University, Shenzhen, P.R. China.ORCID 0000-0002-7705-773X
Yujiu YangOpen FIESTA Center, Tsinghua University, Shenzhen, P.R. China.
University Town of Shenzhen · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Automated cell classification is an important yet a challenging computer vision task with significant benefits to biomedicine. In recent years, there have been several studies attempted to build an artificial intelligence-based cell classifier using label-free cellular images obtained from an optical microscope. Although these studies showed promising results, such classifiers were not able to reflect the biological diversity of different types of cell. While in terms of malignant cell, it is well-known that intracellular actin filaments are altered substantially. This is thought to be closely related to the abnormal growth features of tumor cells, their ability to invade surrounding tissues and also to metastasize. Therefore, being able to classify different types of cell based on their biological behaviors using automated technique is more advantageous. This article reveals the difference in the actin cytoskeleton structures between breast normal and cancer cells, which may provide new information regarding malignant changes and be used as additional diagnostic marker. Since the features cannot be well detected by human eyes, we proposed the application of convolutional neural network (CNN) in cell classification based on actin-labeled fluorescence microscopy images. The CNN was evaluated on a large number of actin-labeled fluorescence microscopy images of one human normal breast epithelial cell line and two types of human breast cancer cell line with different levels of aggressiveness. The study revealed that the CNN performed better in the cell classification task compared to a human expert.

Indexed as

Neural Networks, ComputerPattern Recognition, AutomatedActinsAlgorithmsAutomationBreastBreast NeoplasmsCell LineCell Line, TumorCytoplasmCytoskeletonFemaleHumansImage Processing, Computer-AssistedMachine LearningMCF-7 CellsActins

Identifiers

PMID30865716
PMCPMC6415833
OpenAlexW2921488690

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.