Evidence map›Paper›PMID 30865627›Full record

ArticlePLoS genetics2019

The CPEB translational regulator, Orb, functions together with Par proteins to polarize the Drosophila oocyte.

Justinn Barr, Sofia Charania, Rudolf Gilmutdinov, Konstantin Yakovlev, Yulii Shidlovskii, Paul Schedl

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Mapping parameter spaces of biological switches.PLoS computational biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Justinn BarrDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.
Sofia CharaniaDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.
Rudolf GilmutdinovLaboratory of Gene Expression Regulation in Development, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-8635-8294
Konstantin YakovlevLaboratory of Gene Expression Regulation in Development, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Yulii ShidlovskiiLaboratory of Gene Expression Regulation in Development, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-3643-9889
Paul SchedlDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.ORCID 0000-0001-5704-2349
Institute of Gene Biology · RUPrinceton University · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Genetic regulatory mechanism in development and differentiationR35GM126975 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2018 to 2022
$3.0M
NIGMS NIH HHS R35 GM126975NIGMS NIH HHS T32 GM007388
6 · The paper itself

Abstract

orb is a founding member of the CPEB family of translational regulators and is required at multiple steps during Drosophila oogenesis. Previous studies showed that orb is required during mid-oogenesis for the translation of the posterior/germline determinant oskar mRNA and the dorsal-ventral determinant gurken mRNA. Here, we report that orb also functions upstream of these axes determinants in the polarization of the microtubule network (MT). Prior to oskar and gurken translational activation, the oocyte MT network is repolarized. The MT organizing center at the oocyte posterior is disassembled, and a new MT network is established at the oocyte anterior. Repolarization depends upon cross-regulatory interactions between anterior (apical) and posterior (basal) Par proteins. We show that repolarization of the oocyte also requires orb and that orb is needed for the proper functioning of the Par proteins. orb interacts genetically with aPKC and cdc42 and in egg chambers compromised for orb activity, Par-1 and aPKC protein and aPKC mRNA are mislocalized. Moreover, like cdc42-, the defects in Par protein localization appear to be connected to abnormalities in the cortical actin cytoskeleton. These abnormalities also disrupt the localization of the spectraplakin Shot and the microtubule minus-end binding protein Patronin. These two proteins play a critical role in the repolarization of the MT network.

Indexed as

AnimalsAnimals, Genetically ModifiedCell PolarityCyclic AMP Response Element-Binding ProteinCytoskeletonDrosophila melanogasterDrosophila ProteinsFemaleGenes, InsectGlycogen Synthase Kinase 3GTP-Binding ProteinsMicrofilament ProteinsMicrotubule-Associated ProteinsMutationOocytesOogenesisCdc42 protein, DrosophilaCyclic AMP Response Element-Binding ProteinDrosophila ProteinsGlycogen Synthase Kinase 3grk protein, DrosophilaGTP-Binding ProteinsMicrofilament ProteinsMicrotubule-Associated Proteinsorb protein, Drosophilaosk protein, DrosophilaPar-1 protein, Drosophilapatronin protein, DrosophilaPKC-3 proteinProtein Kinase CRNA-Binding ProteinsRNA, Messengershot protein, DrosophilaTranscription FactorsTransforming Growth Factor alpha

Identifiers

PMID30865627
PMCPMC6433291
OpenAlexW2920846652

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.