Evidence map›Paper›PMID 30864308›Full record

ArticlePacific Symposium on Biocomputing. Pacific Symposium on Biocomputing2019

ODAL: A one-shot distributed algorithm to perform logistic regressions on electronic health records data from multiple clinical sites.

Rui Duan, Mary Regina Boland, Jason H Moore, Yong Chen

Abstract read
In one paragraph

Article in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Learning competing risks across multiple hospitals: one-shot distributed algorithms.Journal of the American Medical Informatics Association : JAMIA · 2024
    Pooled it
  2. Article
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  7. Review
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  9. Federated Adaptive Causal Estimation (FACE) of Target Treatment Effects.Journal of the American Statistical Association · 2025
    Article
  10. DisCJournal of machine learning research : JMLR · 2025
    Article
  11. Article
  12. Centralized and Federated Models for the Analysis of Clinical Data.Annual review of biomedical data science · 2024
    Review
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Rui DuanDepartment of Biostatistics, Epidemiology & Informatics, University of Pennsylvania, 423 Guardian Drive, PA, 19104, USA#Co-first author.
Mary Regina Boland
Jason H Moore
Yong Chen

Funding

Human Pancreas Analysis Program for Type 1 Diabetes - HPAP-T1DU01DK112217 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI MARK A. ATKINSON, KLAUS H KAESTNER · 2021 to 2026
$46.8M
Translational Research Support CoreP30ES013508 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI Rebecca A Simmons · 2006 to 2026
$35.3M
Rare Diseases Data Management and Coordinating CenterU01TR001263 · NCATS · UNIVERSITY OF SOUTH FLORIDA · PI KRISCHER, JEFFREY P · 2014 to 2018
$28.1M
Penn integrated Human Pancreas procurement and Analysis ProgramUC4DK112217 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI BETTS, MICHAEL R, FELDMAN, MICHAEL D · 2016 to 2020
$17.8M
Bioinformatics Strategies for Genome-Wide Association StudiesR01LM010098 · NLM · UNIVERSITY OF PENNSYLVANIA · PI MOORE, JASON H., WILLIAMS, SCOTT MATTHEW · 2009 to 2023
$5.1M
Dynamic learning for post-vaccine event prediction using temporal information in VAERSR01AI130460 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CHEN, YONG, TAO, CUI · 2017 to 2021
$3.4M
Approaches to Genetic Heterogeneity of Obstructive Sleep ApneaR01HL134015 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI PACK, ALLAN I, ROBISHAW, JANET D · 2016 to 2019
$3.2M
Biomedical Computing and Informatics Strategies for Infectious Disease ResearchR01AI116794 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI MOORE, JASON H. · 2016 to 2020
$2.9M
Biomedical Computing and Informatics Strategies for Precision MedicineR01LM012601 · NLM · UNIVERSITY OF PENNSYLVANIA · PI HUANG, XIUZHEN, MOORE, JASON H. · 2017 to 2020
$1.8M
Bioinformatics Strategies for Multidimensional Brain Imaging GeneticsR01LM011360 · NLM · INDIANA UNIVERSITY INDIANAPOLIS · PI MOORE, JASON H., SAYKIN, ANDREW J · 2012 to 2015
$1.4M
A General Framework to Account for Outcome Reporting Bias in Systematic ReviewsR01LM012607 · NLM · UNIVERSITY OF PENNSYLVANIA · PI CHEN, YONG · 2017 to 2020
$1.4M
NCATS NIH HHS U01 TR001263NHLBI NIH HHS R01 HL134015NIAID NIH HHS R01 AI116794NIAID NIH HHS R01 AI130460NIDDK NIH HHS U01 DK112217NIDDK NIH HHS UC4 DK112217NIEHS NIH HHS P30 ES013508NLM NIH HHS R01 LM010098NLM NIH HHS R01 LM011360NLM NIH HHS R01 LM012601NLM NIH HHS R01 LM012607
6 · The paper itself

Abstract

Electronic Health Records (EHR) contain extensive information on various health outcomes and risk factors, and therefore have been broadly used in healthcare research. Integrating EHR data from multiple clinical sites can accelerate knowledge discovery and risk prediction by providing a larger sample size in a more general population which potentially reduces clinical bias and improves estimation and prediction accuracy. To overcome the barrier of patient-level data sharing, distributed algorithms are developed to conduct statistical analyses across multiple sites through sharing only aggregated information. The current distributed algorithm often requires iterative information evaluation and transferring across sites, which can potentially lead to a high communication cost in practical settings. In this study, we propose a privacy-preserving and communication-efficient distributed algorithm for logistic regression without requiring iterative communications across sites. Our simulation study showed our algorithm reached comparative accuracy comparing to the oracle estimator where data are pooled together. We applied our algorithm to an EHR data from the University of Pennsylvania health system to evaluate the risks of fetal loss due to various medication exposures.

Indexed as

AlgorithmsLogistic ModelsComputational BiologyComputer Communication NetworksComputer SimulationDrug-Related Side Effects and Adverse ReactionsElectronic Health RecordsFemaleFetal DeathHumansInfant, NewbornInformation DisseminationInternational Classification of DiseasesLikelihood FunctionsMedical InformaticsPregnancy

Identifiers

PMID30864308
PMCPMC6417819

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.