Evidence map›Paper›PMID 30863922›Full record

ArticleCancer immunology, immunotherapy : CII2019

Autoimmune genetic risk variants as germline biomarkers of response to melanoma immune-checkpoint inhibition.

Vylyny Chat, Robert Ferguson, Danny Simpson, Esther Kazlow, Rebecca Lax, Una Moran, Anna Pavlick, Dennie Frederick, Genevieve Boland, Ryan Sullivan and 5 more

Abstract read
In one paragraph

Article in Cancer immunology, immunotherapy : CII, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Review
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  5. Review
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  16. Article
  17. Review
  18. Review
  19. Biomarkers of response to PD-1 pathway blockade.British journal of cancer · 2022
    Review
  20. Overview of Research on Germline Genetic Variation in Immune Genes and Cancer Outcomes.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Vylyny ChatLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA.
Robert FergusonLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA.
Danny SimpsonLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA.
Esther KazlowLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA.
Rebecca LaxLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA.
Una MoranLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA.
Anna PavlickThe Interdisciplinary Melanoma Cooperative Group, New York University School of Medicine, New York, NY, USA.
Dennie FrederickCenter for Melanoma, Massachusetts General Hospital Cancer Center, Harvard Medical School, Boston, MA, USA.
Genevieve BolandCenter for Melanoma, Massachusetts General Hospital Cancer Center, Harvard Medical School, Boston, MA, USA.
Ryan SullivanCenter for Melanoma, Massachusetts General Hospital Cancer Center, Harvard Medical School, Boston, MA, USA.
Antoni RibasDivision of Hematology-Oncology, Department of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Keith FlahertyCenter for Melanoma, Massachusetts General Hospital Cancer Center, Harvard Medical School, Boston, MA, USA.
Iman OsmanLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA.
Jeffrey WeberLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA.
Tomas KirchhoffLaura and Issac Perlmutter Cancer Center, New York University School of Medicine, 522 First Avenue, New York, NY, 10016, USA. tomas.kirchhoff@nyumc.org.

Funding

Project 4P50CA225450 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KIRCHHOFF, TOMAS · 2019 to 2025
$12.5M
(8) Genomic determinants of the T-cell regulome in immune checkpoint blockadeR01CA227505 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KIRCHHOFF, TOMAS, WEBER, JEFFREY S · 2018 to 2022
$3.0M
The genetic markers of ipilimumab response in patients with metastatic melanomaR21CA184432 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KIRCHHOFF, TOMAS · 2014 to 2015
$406k
NCI NIH HHS P50 CA225450NCI NIH HHS R01 CA227505NCI NIH HHS R21 CA184432NIH HHS 1R21CA184432-01
6 · The paper itself

Abstract

Immune-checkpoint inhibition (ICI) treatments improve outcomes for metastatic melanoma; however, > 60% of treated patients do not respond to ICI. Current biomarkers do not reliably explain ICI resistance. Given the link between ICI and autoimmunity, we investigated if genetic susceptibility to autoimmunity modulates ICI efficacy. In 436 patients with metastatic melanoma receiving single line ICI or combination treatment, we tested 25 SNPs, associated with > 2 autoimmune diseases in recent genome-wide association studies, for modulation of ICI efficacy. We found that rs17388568-a risk variant for allergy, colitis and type 1 diabetes-was associated with increased anti-PD-1 response, with significance surpassing multiple testing adjustments (OR 0.26; 95% CI 0.12-0.53; p = 0.0002). This variant maps to a locus of established immune-related genes: IL2 and IL21. Our study provides first evidence that autoimmune genetic susceptibility may modulate ICI efficacy, suggesting that systematic testing of autoimmune risk loci could reveal personalized biomarkers of ICI response.

Indexed as

AdultAgedAged, 80 and overAntibodies, MonoclonalAutoimmune DiseasesBiomarkers, TumorCTLA-4 AntigenFemaleGenetic Predisposition to DiseaseGerm CellsHumansImmunotherapyInterleukin-2Interleukin-21InterleukinsMaleAntibodies, MonoclonalBiomarkers, TumorCTLA-4 AntigenInterleukin-2Interleukin-21InterleukinsProgrammed Cell Death 1 ReceptorAutoimmunityGermline variantsImmune-checkpoint inhibitionMelanoma

Identifiers

PMID30863922
PMCPMC6531317

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.