Evidence map›Paper›PMID 30863851›Full record

ArticleMolecular biology and evolution2019

Emergence of a Thrombospondin Superfamily at the Origin of Metazoans.

Deborah K Shoemark, Berenice Ziegler, Hiroshi Watanabe, Jennifer Strompen, Richard P Tucker, Suat Özbek, Josephine C Adams

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Molecular biology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Mechanisms of assembly and remodelling of the extracellular matrix.Nature reviews. Molecular cell biology · 2024
    Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Deborah K ShoemarkSchool of Biochemistry, University of Bristol, Bristol, United Kingdom.
Berenice ZieglerCentre for Organismal Studies, Department of Molecular Evolution and Genomics, University of Heidelberg, Heidelberg, Germany.
Hiroshi WatanabeEvolutionary Neurobiology Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan.
Jennifer StrompenCentre for Organismal Studies, Department of Molecular Evolution and Genomics, University of Heidelberg, Heidelberg, Germany.
Richard P TuckerDepartment of Cell Biology and Human Anatomy, University of California at Davis, Davis, CA.
Suat ÖzbekCentre for Organismal Studies, Department of Molecular Evolution and Genomics, University of Heidelberg, Heidelberg, Germany.
Josephine C AdamsSchool of Biochemistry, University of Bristol, Bristol, United Kingdom.
Heidelberg University · DEUniversity of Bristol · GBOkinawa Institute of Science and Technology Graduate University · JPUniversity of California, Davis · US

Funding

Medical Research Council MR/K018043/1
6 · The paper itself

Abstract

Extracellular matrix (ECM) is considered central to the evolution of metazoan multicellularity; however, the repertoire of ECM proteins in nonbilaterians remains unclear. Thrombospondins (TSPs) are known to be well conserved from cnidarians to vertebrates, yet to date have been considered a unique family, principally studied for matricellular functions in vertebrates. Through searches utilizing the highly conserved C-terminal region of TSPs, we identify undisclosed new families of TSP-related proteins in metazoans, designated mega-TSP, sushi-TSP, and poriferan-TSP, each with a distinctive phylogenetic distribution. These proteins share the TSP C-terminal region domain architecture, as determined by domain composition and analysis of molecular models against known structures. Mega-TSPs, the only form identified in ctenophores, are typically >2,700 aa and are also characterized by N-terminal leucine-rich repeats and central cadherin/immunoglobulin domains. In cnidarians, which have a well-defined ECM, Mega-TSP was expressed throughout embryogenesis in Nematostella vectensis, with dynamic endodermal expression in larvae and primary polyps and widespread ectodermal expression in adult Nematostella vectensis and Hydra magnipapillata polyps. Hydra Mega-TSP was also expressed during regeneration and siRNA-silencing of Mega-TSP in Hydra caused specific blockade of head regeneration. Molecular phylogenetic analyses based on the conserved TSP C-terminal region identified each of the TSP-related groups to form clades distinct from the canonical TSPs. We discuss models for the evolution of the newly defined TSP superfamily by gene duplications, radiation, and gene losses from a debut in the last metazoan common ancestor. Together, the data provide new insight into the evolution of ECM and tissue organization in metazoans.

Indexed as

Biological EvolutionAnimalsAnthozoaHydraInvertebratesMultigene FamilyThrombospondinsThrombospondinsextracellular matrixmetazoamulticellularityprotein domainsregeneration

Identifiers

PMID30863851
PMCPMC6526912
OpenAlexW2921526696

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.