Evidence map›Paper›PMID 30862674›Full record

ArticleThe Journal of biological chemistry2019

The retroviral accessory proteins S2, Nef, and glycoMA use similar mechanisms for antagonizing the host restriction factor SERINC5.

Iqbal Ahmad, Sunan Li, Rongrong Li, Qingqing Chai, Lixin Zhang, Bin Wang, Changqing Yu, Yong-Hui Zheng

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. EIAV encodes an accessory protein that antagonizes the host restriction factor equine tetherin.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. SERINC5 counters retroviruses and non-retroviruses.Frontiers in cellular and infection microbiology · 2024
    Review
  14. Review
  15. Review
  16. HIV-1 restriction by SERINC5.Medical microbiology and immunology · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Iqbal AhmadFrom the Harbin Veterinary Research Institute, CAAS-Michigan State University Joint Laboratory of Innate Immunity, State Key Laboratory of Veterinary Biotechnology, Chinese Academy of Agricultural Sciences, Harbin 150069, China and.
Sunan LiFrom the Harbin Veterinary Research Institute, CAAS-Michigan State University Joint Laboratory of Innate Immunity, State Key Laboratory of Veterinary Biotechnology, Chinese Academy of Agricultural Sciences, Harbin 150069, China and.
Rongrong LiFrom the Harbin Veterinary Research Institute, CAAS-Michigan State University Joint Laboratory of Innate Immunity, State Key Laboratory of Veterinary Biotechnology, Chinese Academy of Agricultural Sciences, Harbin 150069, China and.
Qingqing ChaiDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan 48824.
Lixin ZhangFrom the Harbin Veterinary Research Institute, CAAS-Michigan State University Joint Laboratory of Innate Immunity, State Key Laboratory of Veterinary Biotechnology, Chinese Academy of Agricultural Sciences, Harbin 150069, China and.
Bin WangFrom the Harbin Veterinary Research Institute, CAAS-Michigan State University Joint Laboratory of Innate Immunity, State Key Laboratory of Veterinary Biotechnology, Chinese Academy of Agricultural Sciences, Harbin 150069, China and.
Changqing YuFrom the Harbin Veterinary Research Institute, CAAS-Michigan State University Joint Laboratory of Innate Immunity, State Key Laboratory of Veterinary Biotechnology, Chinese Academy of Agricultural Sciences, Harbin 150069, China and.
Yong-Hui ZhengFrom the Harbin Veterinary Research Institute, CAAS-Michigan State University Joint Laboratory of Innate Immunity, State Key Laboratory of Veterinary Biotechnology, Chinese Academy of Agricultural Sciences, Harbin 150069, China and zhengyo@msu.edu.ORCID 0000-0002-1098-7385
Chinese Academy of Agricultural Sciences · CNMichigan State University · US

Funding

The role of SERINC5 in HIV-1 replicationR01AI145504 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI ZHENG, YONG-HUI · 2019 to 2023
$1.5M
To eradicate the HIV macrophage reservoirR01AI120189 · NIAID · MICHIGAN STATE UNIVERSITY · PI ZHENG, YONG-HUI · 2015 to 2017
$589k
Mechanism of HIV-1 Env Degradation by the ERAD pathwayR21AI122863 · NIAID · MICHIGAN STATE UNIVERSITY · PI ZHENG, YONG-HUI · 2016 to 2017
$426k
Mechanistic understanding of HIV-1 broad neutralizing antibody evolutionR21AI138707 · NIAID · MICHIGAN STATE UNIVERSITY · PI YU, KEFEI · 2018 to 2019
$426k
NIAID NIH HHS R01 AI120189NIAID NIH HHS R01 AI145504NIAID NIH HHS R21 AI122863NIAID NIH HHS R21 AI138707
6 · The paper itself

Abstract

Serine incorporator 5 (SERINC5) is a recently identified restriction factor that blocks virus entry but is antagonized by three unrelated retroviral accessory proteins. The S2 protein from equine infectious anemia virus (EIAV) has been reported to reduce SERINC5 expression at steady-state levels likely via the endocytic pathway; however, the precise mechanism is still unclear. Here, we investigated how EIAV S2 protein down-regulates SERINC5 compared with down-regulation induced by Nef from HIV-1 and glycoMA proteins from murine leukemia virus (MLV). Using bimolecular fluorescence complementation (BiFC) assay and immunoprecipitation (IP), we detected an interaction between S2 and SERINC5. We found that this interaction relies on the S2 myristoylation site, indicating that it may occur on the plasma membrane. S2 internalized SERINC5 via receptor-mediated endocytosis and targeted it to endosomes and lysosomes, resulting in a ubiquitination-dependent decrease in SERINC5 expression at steady-state levels. Both BiFC and IP detected a glycoMA-SERINC5 interaction, but a Nef-SERINC5 interaction was detected only by BiFC. Moreover, S2 and glycoMA down-regulated SERINC5 more effectively than did Nef. We further show that unlike Nef, both S2 and glycoMA effectively down-regulate SERINC2 and also SERINC5 from

Indexed as

AnimalsDown-RegulationEndocytosisHEK293 CellsHeLa CellsHumansMembrane Proteinsnef Gene Products, Human Immunodeficiency VirusOrganellesProtein BindingViral ProteinsMembrane Proteinsnef Gene Products, Human Immunodeficiency VirusS2 protein, Equine infectious anemia virusSERINC5 protein, humanViral ProteinsEIAV S2HIV Nefhost-pathogen interactioninnate immunityMLV glycoGagrestriction factorSERINC5viral proteinvirusvirus entry

Identifiers

PMID30862674
PMCPMC6497950
OpenAlexW2921950488

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.