Evidence map›Paper›PMID 30861289›Full record

ArticleEcology letters2019

Endemic infection can shape exposure to novel pathogens: Pathogen co-occurrence networks in the Serengeti lions.

Nicholas M Fountain-Jones, Craig Packer, Maude Jacquot, F Guillaume Blanchet, Karen Terio, Meggan E Craft

Abstract readLetter
In one paragraph

Article in Ecology letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nicholas M Fountain-JonesDepartment of Veterinary Population Medicine, University of Minnesota, 1365 Gortner Avenue, St Paul, MN, 55108, USA.
Craig PackerDepartment of Ecology Evolution and Behavior, University of Minnesota, St Paul, MN, 55408, USA.
Maude JacquotINRA, UMR346 EPIA, Epidémiologie des maladies Animales et zoonotiques, 63122, Saint-Genès-Champanelle, France.
F Guillaume BlanchetDépartement de biologie, Université de Sherbrooke, 2500 Boulevard Université, Sherbrooke, QC, Canada, J1K 2R1.
Karen TerioZoological Pathology Program, University of Illinois, Urbana-Champaign, IL, USA.
Meggan E CraftDepartment of Veterinary Population Medicine, University of Minnesota, 1365 Gortner Avenue, St Paul, MN, 55108, USA.

Funding

Cooperative State Research Service, U.S. Department of Agriculture MIN-62-098National Science Foundation 1654609National Science Foundation DEB-1413925University of Minnesota' Office of the Vice President for Research and Academic Health Center Seed Grant
6 · The paper itself

Abstract

Pathogens are embedded in a complex network of microparasites that can collectively or individually alter disease dynamics and outcomes. Endemic pathogens that infect an individual in the first years of life, for example, can either facilitate or compete with subsequent pathogens thereby exacerbating or ameliorating morbidity and mortality. Pathogen associations are ubiquitous but poorly understood, particularly in wild populations. We report here on 10 years of serological and molecular data in African lions, leveraging comprehensive demographic and behavioural data to test if endemic pathogens shape subsequent infection by epidemic pathogens. We combine network and community ecology approaches to assess broad network structure and characterise associations between pathogens across spatial and temporal scales. We found significant non-random structure in the lion-pathogen co-occurrence network and identified both positive and negative associations between endemic and epidemic pathogens. Our results provide novel insights on the complex associations underlying pathogen co-occurrence networks.

Indexed as

LionsAnimalsSocial BehaviorBabesiacaliciviruscanine distemper virusco-infectioncommunity assemblycoronavirusfeline immunodeficiency virusparvovirus

Identifiers

PMID30861289
PMCPMC7163671

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.