Evidence map›Paper›PMID 30861072›Full record

ArticleJournal of experimental botany2019

Conservation of ethanol fermentation and its regulation in land plants.

Liem T Bui, Giacomo Novi, Lara Lombardi, Cristina Iannuzzi, Jacopo Rossi, Antonietta Santaniello, Anna Mensuali, Françoise Corbineau, Beatrice Giuntoli, Pierdomenico Perata and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
11.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 87 citations in OpenAlex.

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  15. Plants (Basel, Switzerland) · 2023
    Article
  16. Target of rapamycin signaling couples energy to oxygen sensing to modulate hypoxic gene expression inProceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Liem T BuiInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy.
Giacomo NoviInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy.
Lara LombardiBiology Department, University of Pisa, Pisa, Italy.
Cristina IannuzziDepartment of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy.
Jacopo RossiDepartment of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy.
Antonietta SantanielloGlobal R&D, Valagro SpA, Atessa, Italy.
Anna MensualiInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy.
Françoise CorbineauUMR 7622 CNRS-UPMC, Biologie du développement, Institut de Biologie Paris Seine, Sorbonne Université, Paris, France.
Beatrice GiuntoliInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy.
Pierdomenico PerataInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy.
Mirko ZaffagniniDepartment of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy.
Francesco LicausiInstitute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy.
Scuola Superiore Sant'Anna · ITUniversity of Bologna · ITUniversity of Pisa · ITCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ethanol fermentation is considered as one of the main metabolic adaptations to ensure energy production in higher plants under anaerobic conditions. Following this pathway, pyruvate is decarboxylated and reduced to ethanol with the concomitant oxidation of NADH to NAD+. Despite its acknowledgement as an essential metabolic strategy, the conservation of this pathway and its regulation throughout plant evolution have not been assessed so far. To address this question, we compared ethanol fermentation in species representing subsequent steps in plant evolution and related it to the structural features and transcriptional regulation of the two enzymes involved: pyruvate decarboxylase (PDC) and alcohol dehydrogenase (ADH). We observed that, despite the conserved ability to produce ethanol upon hypoxia in distant phyla, transcriptional regulation of the enzymes involved is not conserved in ancient plant lineages, whose ADH homologues do not share structural features distinctive for acetaldehyde/ethanol-processing enzymes. Moreover, Arabidopsis mutants devoid of ADH expression exhibited enhanced PDC activity and retained substantial ethanol production under hypoxic conditions. Therefore, we concluded that, whereas ethanol production is a highly conserved adaptation to low oxygen, its catalysis and regulation in land plants probably involve components that will be identified in the future.

Indexed as

Biological EvolutionFermentationAlcohol DehydrogenaseEmbryophytaEthanolPyruvate DecarboxylaseAlcohol DehydrogenaseEthanolPyruvate DecarboxylaseAlcohol dehydrogenaseanaerobic metabolismanoxiafermentationhypoxiaplant evolutionsubmergence

Identifiers

PMID30861072
PMCPMC6436157
OpenAlexW2922148559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.