Evidence map›Paper›PMID 30858491›Full record

ArticleScientific reports2019

Identification and characterization of core abscisic acid (ABA) signaling components and their gene expression profile in response to abiotic stresses in Setaria viridis.

Karoline Estefani Duarte, Wagner Rodrigo de Souza, Thaís Ribeiro Santiago, Bruno Leite Sampaio, Ana Paula Ribeiro, Michelle Guitton Cotta, Bárbara Andrade Dias Brito da Cunha, Pierre Roger René Marraccini, Adilson Kenji Kobayashi, Hugo Bruno Correa Molinari

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 47 citations in OpenAlex.

  1. Harnessing Setaria as a Model for CPlants (Basel, Switzerland) · 2025
    Review
  2. Review
  3. Genome-Wide Identification of thePlants (Basel, Switzerland) · 2025
    Article
  4. Rice Responses to Abiotic Stress: Key Proteins and Molecular Mechanisms.International journal of molecular sciences · 2025
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Evolution of gene regulatory network of CPlant communications · 2023
    Article
  11. Evolutionary Analysis ofInternational journal of molecular sciences · 2023
    Article
  12. Article
  13. Article
  14. Multi-omics intervention inFrontiers in plant science · 2022
    Review
  15. Article
  16. Article
  17. An Update on Crop ABA Receptors.Plants (Basel, Switzerland) · 2021
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Karoline Estefani DuartePlant Biotechnology Program, Federal University of Lavras (UFLA), Lavras, MG, 37200-000, Brazil.
Wagner Rodrigo de SouzaGenetics and Biotechnology Laboratory, Embrapa Agroenergy (CNPAE), Brasilia, DF, 70770-901, Brazil.
Thaís Ribeiro SantiagoGenetics and Biotechnology Laboratory, Embrapa Agroenergy (CNPAE), Brasilia, DF, 70770-901, Brazil.
Bruno Leite SampaioGenetics and Biotechnology Laboratory, Embrapa Agroenergy (CNPAE), Brasilia, DF, 70770-901, Brazil.ORCID 0000-0002-9251-5022
Ana Paula RibeiroGenetics and Biotechnology Laboratory, Embrapa Agroenergy (CNPAE), Brasilia, DF, 70770-901, Brazil.
Michelle Guitton CottaDepartment of Cell Biology, University of Brasília (UnB), Brasília, DF, 70910-900, Brazil.
Bárbara Andrade Dias Brito da CunhaGenetics and Biotechnology Laboratory, Embrapa Agroenergy (CNPAE), Brasilia, DF, 70770-901, Brazil.
Pierre Roger René MarracciniPlant Biotechnology Program, Federal University of Lavras (UFLA), Lavras, MG, 37200-000, Brazil.
Adilson Kenji KobayashiGenetics and Biotechnology Laboratory, Embrapa Agroenergy (CNPAE), Brasilia, DF, 70770-901, Brazil.
Hugo Bruno Correa MolinariGenetics and Biotechnology Laboratory, Embrapa Agroenergy (CNPAE), Brasilia, DF, 70770-901, Brazil. hugo.molinari@embrapa.br.
Brazilian Agricultural Research Corporation · BRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRUniversidade de Brasília · BRUniversidade Federal de Lavras · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Abscisic acid (ABA) is an essential phytohormone that regulates growth, development and adaptation of plants to environmental stresses. In Arabidopsis and other higher plants, ABA signal transduction involves three core components namely PYR/PYL/RCAR ABA receptors (PYLs), type 2C protein phosphatases (PP2Cs) and class III SNF-1-related protein kinase 2 (SnRK2s). In the present study, we reported the identification and characterization of the core ABA signaling components in Setaria viridis, an emerging model plant for cereals and feedstock crops presenting C4 metabolism, leading to the identification of eight PYL (SvPYL1 to 8), twelve PP2C (SvPP2C1 to 12) and eleven SnRK2 (SvSnRK2.1 through SvSnRK2.11) genes. In order to study the expression profiles of these genes, two different S. viridis accessions (A10.1 and Ast-1) were submitted to drought, salinity and cold stresses, in addition to application of exogenous ABA. Differential gene expression profiles were observed in each treatment and plant genotype, demonstrating variations of ABA stress responses within the same species. These differential responses to stresses were also assessed by physiological measurements such as photosynthesis, stomatal conductance and transpiration rate. This study allows a detailed analysis of gene expression of the core ABA signaling components in Setaria viridis submitted to different treatments and provides suitable targets for genetic engineering of C4 plants aiming tolerance to abiotic stresses.

Indexed as

Abscisic AcidAdaptation, PhysiologicalCold-Shock ResponseDroughtsGene Expression Regulation, PlantPhotosynthesisPlant Growth RegulatorsPlant ProteinsPlant TranspirationSalt StressSetaria PlantAbscisic AcidPlant Growth RegulatorsPlant Proteins

Identifiers

PMID30858491
PMCPMC6411973
OpenAlexW2922214163

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.