Evidence map›Paper›PMID 30858425›Full record

ArticleScientific reports2019

Cargo diffusion shortens single-kinesin runs at low viscous drag.

John O Wilson, David A Quint, Ajay Gopinathan, Jing Xu

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

John O WilsonDepartment of Physics, University of California, Merced, California, 95343, USA.
David A QuintNSF CREST: Center for Cellular and Biomolecular Machines, University of California, Merced, California, 95343, USA. dquint@ucmerced.edu.
Ajay GopinathanDepartment of Physics, University of California, Merced, California, 95343, USA. agopinathan@ucmerced.edu.
Jing XuDepartment of Physics, University of California, Merced, California, 95343, USA. jxu8@ucmerced.edu.

Funding

Do Cargo Membrane Fluidity and Microdomain Formation Impact Motor Protein-Based Motility?R15GM120682 · NIGMS · UNIVERSITY OF CALIFORNIA, MERCED · PI XU, JING · 2016 to 2024
$1.4M
NIGMS NIH HHS R15 GM120682
6 · The paper itself

Abstract

Molecular motors such as kinesin-1 drive active, long-range transport of cargos along microtubules in cells. Thermal diffusion of the cargo can impose a randomly directed, fluctuating mechanical load on the motor carrying the cargo. Recent experiments highlighted a strong asymmetry in the sensitivity of single-kinesin run length to load direction, raising the intriguing possibility that cargo diffusion may non-trivially influence motor run length. To test this possibility, here we employed Monte Carlo-based simulations to evaluate the transport of cargo by a single kinesin. Our simulations included physiologically relevant viscous drag on the cargo and interrogated a large parameter space of cytoplasmic viscosities, cargo sizes, and motor velocities that captures their respective ranges in living cells. We found that cargo diffusion significantly shortens single-kinesin runs. This diffusion-based shortening is countered by viscous drag, leading to an unexpected, non-monotonic variation in run length as viscous drag increases. To our knowledge, this is the first identification of a significant effect of cargo diffusion on motor-based transport. Our study highlights the importance of cargo diffusion and load-detachment kinetics on single-motor functions under physiologically relevant conditions.

Indexed as

DiffusionKinesinsKineticsMolecular Motor ProteinsMonte Carlo MethodProtein TransportTemperatureViscosityKinesinsMolecular Motor Proteins

Identifiers

PMID30858425
PMCPMC6411862

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.