Evidence map›Paper›PMID 30857296›Full record

ArticleInternational journal of molecular sciences2019

Natural History of a Satellite DNA Family: From the Ancestral Genome Component to Species-Specific Sequences, Concerted and Non-Concerted Evolution.

Alexander Belyayev, Jiřina Josefiová, Michaela Jandová, Ruslan Kalendar, Karol Krak, Bohumil Mandák

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
  2. Article
  3. Mixed modes of satellite DNA and transposable element evolution, which shape the repetitive landscape of air-breathing catfishes (Clarias).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
    Article
  4. Article
  5. Satellite DNA Genomics: The Ongoing Story.International journal of molecular sciences · 2025
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Repeatome Analysis and Satellite DNA Chromosome Patterns inInternational journal of molecular sciences · 2024
    Article
  11. Article
  12. Article
  13. Review
  14. Uniparental expression of ribosomal RNA in ×Frontiers in plant science · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Satellitome Analysis of the Pacific OysterInternational journal of molecular sciences · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alexander BelyayevThe Czech Academy of Sciences, Institute of Botany, Zámek 1, 252 43 Průhonice, Czech Republic. alexander.belyayev@ibot.cas.cz.ORCID 0000-0002-8933-6197
Jiřina JosefiováThe Czech Academy of Sciences, Institute of Botany, Zámek 1, 252 43 Průhonice, Czech Republic. jirina.josefiova@ibot.cas.cz.
Michaela JandováThe Czech Academy of Sciences, Institute of Botany, Zámek 1, 252 43 Průhonice, Czech Republic. michaela.jandova@ibot.cas.cz.ORCID 0000-0002-4994-3814
Ruslan KalendarDepartment of Agricultural Sciences, University of Helsinki, P.O. Box 27 (Latokartanonkaari 5), 00014 Helsinki, Finland. ruslan.kalendar@helsinki.fi.ORCID 0000-0003-3986-2460
Karol KrakThe Czech Academy of Sciences, Institute of Botany, Zámek 1, 252 43 Průhonice, Czech Republic. karol.krak@ibot.cas.cz.
Bohumil MandákThe Czech Academy of Sciences, Institute of Botany, Zámek 1, 252 43 Průhonice, Czech Republic. bohumil.mandak@ibot.cas.cz.

Funding

Akademie věd České republiky RVO 67985939Grantová Agentura České Republiky 13-02290S
6 · The paper itself

Abstract

Satellite DNA (satDNA) is the most variable fraction of the eukaryotic genome. Related species share a common ancestral satDNA library and changing of any library component in a particular lineage results in interspecific differences. Although the general developmental trend is clear, our knowledge of the origin and dynamics of satDNAs is still fragmentary. Here, we explore whole genome shotgun Illumina reads using the RepeatExplorer (RE) pipeline to infer satDNA family life stories in the genomes of

Indexed as

ChenopodiumDiploidyDNA, PlantDNA, SatelliteEvolution, MolecularGenome ComponentsGenome, PlantHigh-Throughput Nucleotide SequencingPhylogenySequence Analysis, DNASpecies SpecificityDNA, PlantDNA, Satellitegenome evolutionhigh order repeatsnext-generation sequencingplantssatellite DNA

Identifiers

PMID30857296
PMCPMC6429384

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.