Evidence map›Paper›PMID 30857219›Full record

ArticleGenes2019

Molecular Evolution of Tryptophan Hydroxylases in Vertebrates: A Comparative Genomic Survey.

Junmin Xu, Yanping Li, Yunyun Lv, Chao Bian, Xinxin You, Daiji Endoh, Hiroki Teraoka, Qiong Shi

Open access · goldAbstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Molecular Evolution of clock Genes in Vertebrates.Journal of molecular evolution · 2021
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Junmin XuSchool of Veterinary Medicine, Rakuno Gakuen University, Ebetsu 069-8501, Japan. xujunmin@genomics.cn.
Yanping LiBGI-Shenzhen, Shenzhen 518083, China. lvyunyun@genomics.cn.
Yunyun LvShenzhen Key Lab of Marine Genomics, Guangdong Provincial Key Lab of Molecular Breeding in Marine Economic Animals, BGI Academy of Marine Sciences, BGI Marine, BGI, Shenzhen 518083, China. lvyunyun@genomics.cn.
Chao BianShenzhen Key Lab of Marine Genomics, Guangdong Provincial Key Lab of Molecular Breeding in Marine Economic Animals, BGI Academy of Marine Sciences, BGI Marine, BGI, Shenzhen 518083, China. bianchao@genomics.cn.
Xinxin YouShenzhen Key Lab of Marine Genomics, Guangdong Provincial Key Lab of Molecular Breeding in Marine Economic Animals, BGI Academy of Marine Sciences, BGI Marine, BGI, Shenzhen 518083, China. youxinxin@genomics.cn.ORCID 0000-0002-0136-7387
Daiji EndohSchool of Veterinary Medicine, Rakuno Gakuen University, Ebetsu 069-8501, Japan. dendoh@rakuno.ac.jp.ORCID 0000-0001-7441-1097
Hiroki TeraokaSchool of Veterinary Medicine, Rakuno Gakuen University, Ebetsu 069-8501, Japan. hteraoka@rakuno.ac.jp.
Qiong ShiBGI-Shenzhen, Shenzhen 518083, China. shiqiong@genomics.cn.ORCID 0000-0002-6358-976X
BGI Group (China) · CNRakuno Gakuen University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Serotonin is a neurotransmitter involved in various physiological processes in the central and peripheral nervous systems. Serotonin is also a precursor for melatonin biosynthesis, which mainly occurs in the pineal gland of vertebrates. Tryptophan hydroxylase (TPH) acts as the rate-limiting enzyme in serotonin biosynthesis and is the initial enzyme involved in the synthesis of melatonin. Recently, two enzymes-TPH1 and TPH2-were reported to form the TPH family in vertebrates and to play divergent roles in serotonergic systems. Here, we examined the evolution of the TPH family from 70 vertebrate genomes. Based on the sequence similarity, we extracted 184 predicted

Indexed as

Evolution, MolecularAnimalsChickensHumansProtein ConformationSelection, GeneticTryptophan HydroxylaseTurtlesXenopusZebrafishTryptophan Hydroxylasemelatonin biosynthesismolecular evolutionphylogenetic analysispositive selectionserotonintryptophan hydroxylase (TPH)vertebrate

Identifiers

PMID30857219
PMCPMC6470480
OpenAlexW2921176049

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.