Evidence map›Paper›PMID 30857167›Full record

ArticleInternational journal of molecular sciences2019

CUBAN, a Case Study of Selective Binding: Structural Details of the Discrimination between Ubiquitin and NEDD8.

Elena Santonico, Ridvan Nepravishta, Walter Mandaliti, Luisa Castagnoli, Gianni Cesareni, Maurizio Paci

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Elena SantonicoDepartment of Biology, Tor Vergata University of Rome, 00133 Rome, Italy. elena.santonico@uniroma2.it.
Ridvan NepravishtaSchool of Pharmacy, East Anglia University, Norwich NR47TJ, UK. nprrvn00@uniroma2.it.ORCID 0000-0002-0051-762X
Walter MandalitiDepartment of Chemical Science and Technologies, Tor Vergata University of Rome, 00133 Rome, Italy. w.mandaliti@alice.it.
Luisa CastagnoliDepartment of Biology, Tor Vergata University of Rome, 00133 Rome, Italy. castagnoli@uniroma2.it.ORCID 0000-0001-5283-8671
Gianni CesareniDepartment of Biology, Tor Vergata University of Rome, 00133 Rome, Italy. Cesareni@uniroma2.it.
Maurizio PaciDepartment of Chemical Science and Technologies, Tor Vergata University of Rome, 00133 Rome, Italy. paci@uniroma2.it.ORCID 0000-0002-3358-7018
University of Rome Tor Vergata · ITUniversity of East Anglia · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The newly identified CUBAN (Cullin binding domain associating with NEDD8) domain recognizes both ubiquitin and the ubiquitin-like NEDD8. Despite the high similarity between the two molecules, CUBAN shows a clear preference for NEDD8, free and conjugated to cullins. We previously characterized the domain structure, both alone and in complex with NEDD8. The results here reported are addressed to investigate the determinants that drive the selective binding of CUBAN towards NEDD8 and ubiquitin. The

Indexed as

HumansMolecular Docking SimulationMolecular Dynamics SimulationNEDD8 ProteinNuclear Magnetic Resonance, BiomolecularProtein BindingProtein ConformationProtein Interaction Domains and MotifsProtein Interaction MapsUbiquitinUbiquitinationNEDD8 ProteinNEDD8 protein, humanUbiquitinbiomolecular NMRbiomolecular recognitionNEDD8protein–protein interactionsubiquitin

Identifiers

PMID30857167
PMCPMC6429362
OpenAlexW2921291604

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.