Evidence map›Paper›PMID 30856225›Full record

ArticlePloS one2019

DEP1 is involved in regulating the carbon-nitrogen metabolic balance to affect grain yield and quality in rice (Oriza sativa L.).

Mingzhu Zhao, Minghui Zhao, Shuang Gu, Jian Sun, Zuobin Ma, Lili Wang, Wenjing Zheng, Zhengjin Xu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 40 citations in OpenAlex.

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  13. Both overlapping and independent loci underlie seed number per pod and seed weight inMolecular breeding : new strategies in plant improvement · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Mingzhu ZhaoRice Research Institute, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Minghui ZhaoRice Research Institute, Shenyang Agricultural University, Shenyang, China.
Shuang GuRice Research Institute, Shenyang Agricultural University, Shenyang, China.
Jian SunRice Research Institute, Shenyang Agricultural University, Shenyang, China.
Zuobin MaRice Research Institute, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Lili WangRice Research Institute, Shenyang Agricultural University, Shenyang, China.
Wenjing ZhengRice Research Institute, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Zhengjin XuRice Research Institute, Shenyang Agricultural University, Shenyang, China.ORCID 0000-0003-2475-2066
Shenyang Agricultural University · CNRice Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The DEP1 (dense and erect panicle 1) gene, which corresponds to the erect panicle architecture, shows a pleiotropic effect in increasing grain yield and nitrogen use efficiency (NUE) in rice. Nevertheless, it remains unclear whether the carbon-nitrogen metabolic balance changes as the dep1 allele enhances nitrogen uptake and assimilation. In this study, we generated transgenic Akitakomati plants by overexpressing dep1 and analyzed the carbon-nitrogen metabolic status, gene expression profiles, and grain yield and quality. Under either low or high nitrogen growth conditions, the carbon-nitrogen metabolic balance of dep1-overexpressed lines was broken in stem sheaths and leaves but not in grains; the dep1-overexpressed plants showed higher expressions of glutamine synthetase (GS) and glutamate synthase (GOGAT) genes than the wildtype, along with increased total nitrogen and soluble protein content in the straw at maturity. However, the ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) and phosphoenolpyruvate carboxylase (PEPC) genes were downregulated in dep1-overexpressed plants, leading to a decreased carbohydrate content and carbon/nitrogen ratio. Although the unbalanced carbon-nitrogen metabolism decreased the grain-filling rate, grain setting percentage, 1000 grain weight, and grain quality in dep1-overexpressed lines, it led to increased grain numbers per panicle and consequently increased grain yield. Our results suggest that an unbalanced carbon-nitrogen metabolic status is a major limiting factor for further improving grain yield and quality in erect panicle varieties.

Indexed as

CarbonEdible GrainGene Expression Regulation, PlantNitrogenOryzaPlant ProteinsPlants, Genetically ModifiedUp-RegulationCarbonNitrogenPlant Proteins

Identifiers

PMID30856225
PMCPMC6411142
OpenAlexW2922422364

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.