Evidence map›Paper›PMID 30851086›Full record

ArticleCancer medicine2019

The genomic mutation spectrums of breast fibroadenomas in Chinese population by whole exome sequencing analysis.

Shang-Nao Xie, Yuan-Jie Cai, Bo Ma, Yanting Xu, Peng Qian, Juan-Di Zhou, Fu-Guang Zhao, Jie Chen

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Fibroepithelial tumours of the breast-a review.Virchows Archiv : an international journal of pathology · 2022
    Review
  8. Article
  9. Genetic differences between benign phyllodes tumors and fibroadenomas revealed through targeted next generation sequencing.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
    Article
  10. Fibroepithelial lesions revisited: implications for diagnosis and management.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Shang-Nao XieDepartment of Breast Surgery, Zhejiang Hospital, Hangzhou, P.R. China.ORCID 0000-0002-5154-6447
Yuan-Jie CaiDepartment of Breast Surgery, Zhejiang Hospital, Hangzhou, P.R. China.
Bo MaDepartment of Breast Surgery, Zhejiang Hospital, Hangzhou, P.R. China.
Yanting XuDivision of Molecular Genetics, Joingenome Diagnostics, Hangzhou, P.R. China.
Peng QianDepartment of Bioinformatics, Joingenome Diagnostics, Hangzhou, P.R. China.
Juan-Di ZhouDepartment of Breast Surgery, Zhejiang Hospital, Hangzhou, P.R. China.
Fu-Guang ZhaoDepartment of Breast Surgery, Zhejiang Hospital, Hangzhou, P.R. China.
Jie ChenDepartment of Breast Surgery, Zhejiang Hospital, Hangzhou, P.R. China.
Zhejiang Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fibroadenomas (FAs) are the most common fibroepithelial lesions and the most common benign tumors of the breast in women of reproductive age. Although MED12 mutations, an overwhelming majority of all mutations, and some other gene mutations have been found in FAs, the genomic landscapes of FAs are still not completely clear and the genomic mutation spectrums of FAs in Chinese population remains unknown. Here, by performing whole exome sequencing of 12 FAs and the corresponding normal breast tissues in Chinese Han population, we observed the somatic and germline landscapes of genetic alterations. We identified 16 recurrently mutated genes with 37 nonsynonymous or frameshift somatic mutations and 27 recurrent somatic copy number variants (CNVs). In these mutated genes, MED12 was the most common in FAs, harboring 6 nonsynonymous/frameshift somatic mutations and 1 CNV. In addition, 6 germline mutations of tumor susceptibility genes in 5 FAs were identified and the tumor mutational burden of the 5 FAs was significantly higher than the other 7 FAs without germline mutations. This study provides genomic mutation spectrums of FAs in Chinese population and expand the genetic spectrum of FAs.

Indexed as

Biomarkers, TumorExome SequencingGenome-Wide Association StudyMutationAllelesAsian PeopleBreast NeoplasmsChinaComputational BiologyFemaleFibroadenomaGene FrequencyGenomicsGerm-Line MutationHumansBiomarkers, Tumorcopy number variationfibroadenomagermline mutationMED12somatic mutationtumor mutational burden

Identifiers

PMID30851086
PMCPMC6536971
OpenAlexW2921257794

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.