Evidence map›Paper›PMID 30850524›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Regulatory control of Sgs1 and Dna2 during eukaryotic DNA end resection.

Chaoyou Xue, Weibin Wang, J Brooks Crickard, Corentin J Moevus, Youngho Kwon, Patrick Sung, Eric C Greene

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. DNA end resection during homologous recombination.Current opinion in genetics & development · 2021
    Review
  12. Article
  13. Article
  14. Review
  15. Clutch mechanism of chemomechanical coupling in a DNA resecting motor nuclease.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Chaoyou XueDepartment of Biochemistry & Molecular Biophysics, Columbia University, New York, NY 10032.
Weibin WangDepartment of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT 06520.
J Brooks CrickardDepartment of Biochemistry & Molecular Biophysics, Columbia University, New York, NY 10032.
Corentin J MoevusDepartment of Pathology and Cell Biology, Columbia University, New York, NY 10032.
Youngho KwonDepartment of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT 06520.
Patrick SungDepartment of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT 06520.
Eric C GreeneDepartment of Biochemistry & Molecular Biophysics, Columbia University, New York, NY 10032; ecg2108@cumc.columbia.edu.
Columbia University · USYale University · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI WALTER J. CHAZIN · 2001 to 2026
$89.6M
TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Robin Jean Leach · 1991 to 2026
$59.1M
YEAST DNA REPAIR GENES AND PROTEINS OF THE RAD52 GROUPR01ES007061 · NIEHS · YALE UNIVERSITY · PI Patrick Sung · 1995 to 2026
$9.4M
Protein purification instrumentation in support of single molecule studies of genome integrityR35GM118026 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GREENE, ERIC C · 2016 to 2025
$5.7M
Genome Maintenance via the BRCA-PALB2 Tumor Suppressor NetworkR01CA220123 · NCI · YALE UNIVERSITY · PI SUNG, PATRICK · 2017 to 2019
$1.2M
NCI NIH HHS P01 CA092584NCI NIH HHS P30 CA054174NCI NIH HHS R01 CA220123NIEHS NIH HHS R01 ES007061NIGMS NIH HHS R35 GM118026
6 · The paper itself

Abstract

In the repair of DNA double-strand breaks by homologous recombination, the DNA break ends must first be processed into 3' single-strand DNA overhangs. In budding yeast, end processing requires the helicase Sgs1 (BLM in humans), the nuclease/helicase Dna2, Top3-Rmi1, and replication protein A (RPA). Here, we use single-molecule imaging to visualize Sgs1-dependent end processing in real-time. We show that Sgs1 is recruited to DNA ends through Top3-Rmi1-dependent or -independent means, and in both cases Sgs1 is maintained in an immoble state at the DNA ends. Importantly, the addition of Dna2 triggers processive Sgs1 translocation, but DNA resection only occurs when RPA is also present. We also demonstrate that the Sgs1-Dna2-Top3-Rmi1-RPA ensemble can efficiently disrupt nucleosomes, and that Sgs1 itself possesses nucleosome remodeling activity. Together, these results shed light on the regulatory interplay among conserved protein factors that mediate the nucleolytic processing of DNA ends in preparation for homologous recombination-mediated chromosome damage repair.

Indexed as

DNA Breaks, Double-StrandedDNA RepairDNA HelicasesHomologous RecombinationNucleosomesRecQ HelicasesReplication Protein ASaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSingle Molecule ImagingDNA2 protein, S cerevisiaeDNA HelicasesNucleosomesRecQ HelicasesReplication Protein ASaccharomyces cerevisiae ProteinsSGS1 protein, S cerevisiaeDNA end resectionDNA repairhelicasehomologous recombinationsingle molecule

Identifiers

PMID30850524
PMCPMC6442620
OpenAlexW2921746716

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.