Evidence map›Paper›PMID 30850516›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Selective auxin agonists induce specific AUX/IAA protein degradation to modulate plant development.

Thomas Vain, Sara Raggi, Noel Ferro, Deepak Kumar Barange, Martin Kieffer, Qian Ma, Siamsa M Doyle, Mattias Thelander, Barbora Pařízková, Ondřej Novák and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Plants (Basel, Switzerland) · 2026
    Article
  4. Article
  5. Article
  6. RACK1A positively regulates opening of the apical hook inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Depletion of Gibberellin Signaling Up-RegulatesInternational journal of molecular sciences · 2024
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. SMART v1.0: A Database for Small Molecules with Functional Implications in Plants.Interdisciplinary sciences, computational life sciences · 2022
    Article
  16. Article
  17. Article
  18. Chemical Biology in Auxin Research.Cold Spring Harbor perspectives in biology · 2021
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 9 institutions in 7 countries.

Thomas VainDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.
Sara RaggiDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.ORCID 0000-0002-7925-5772
Noel FerroInstitute of Physical and Theoretical Chemistry, University of Bonn, 53121 Bonn, Germany.
Deepak Kumar BarangeDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.
Martin KiefferCentre for Plant Sciences, University of Leeds, LS2 9JT Leeds, United Kingdom.
Qian MaDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.
Siamsa M DoyleDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.ORCID 0000-0003-4889-3496
Mattias ThelanderDepartment of Plant Biology, Swedish University of Agricultural Sciences, The Linnean Centre for Plant Biology in Uppsala, SE-75007 Uppsala, Sweden.
Barbora PařízkováLaboratory of Growth Regulators, Institute of Experimental Botany, The Czech Academy of Sciences, CZ-78371 Olomouc, Czech Republic.ORCID 0000-0002-8125-2271
Ondřej NovákDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.ORCID 0000-0003-3452-0154
Alexandre IsmailSup'Biotech, IONIS Education Group, 94800 Villejuif, France.
Per-Anders EnquistLaboratories for Chemical Biology Umeå, Chemical Biology Consortium Sweden, Department of Chemistry, Umeå University, SE-901 87 Umeå, Sweden.
Adeline RigalDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.
Małgorzata ŁangowskaDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.
Sigurd Ramans HarboroughCentre for Plant Sciences, University of Leeds, LS2 9JT Leeds, United Kingdom.
Yi ZhangSection of Cell and Developmental Biology, University of California, San Diego, La Jolla, CA 92093-0116.
Karin LjungDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.ORCID 0000-0003-2901-189X
Judy CallisDepartment of Molecular and Cellular Biology, University of California, Davis, CA 95616.
Fredrik AlmqvistLaboratories for Chemical Biology Umeå, Chemical Biology Consortium Sweden, Department of Chemistry, Umeå University, SE-901 87 Umeå, Sweden.ORCID 0000-0002-0504-4446
Stefan KepinskiCentre for Plant Sciences, University of Leeds, LS2 9JT Leeds, United Kingdom.
Mark EstelleSection of Cell and Developmental Biology, University of California, San Diego, La Jolla, CA 92093-0116.
Laurens PauwelsDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0002-0221-9052
Stéphanie RobertDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden; Stephanie.Robert@slu.se.ORCID 0000-0002-0013-3239
Swedish University of Agricultural Sciences · SEUniversity of Leeds · GBHoward Hughes Medical Institute · USUmeå University · SECzech Academy of Sciences, Institute of Experimental Botany · CZInstitut Supérieur des Biotechnologies de Paris · FRUniversity of Bonn · DEUniversity of California, Davis · USVlaams Instituut voor Biotechnologie · BE

Funding

Undergraduate Biomedical Research Training at HunterT34GM007823 · NIGMS · HUNTER COLLEGE · PI FORD, JENNIFER S · 1985 to 2020
$8.2M
MOLECULAR GENETICS OF AUXIN ACTION IN ARABIDOPSISR01GM043644 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI ESTELLE, MARK A · 1989 to 2021
$6.0M
Biotechnology and Biological Sciences Research Council BB/L010623/1NIGMS NIH HHS R01 GM043644NIGMS NIH HHS T34 GM007823
6 · The paper itself

Abstract

Auxin phytohormones control most aspects of plant development through a complex and interconnected signaling network. In the presence of auxin, AUXIN/INDOLE-3-ACETIC ACID (AUX/IAA) transcriptional repressors are targeted for degradation by the SKP1-CULLIN1-F-BOX (SCF) ubiquitin-protein ligases containing TRANSPORT INHIBITOR RESISTANT 1/AUXIN SIGNALING F-BOX (TIR1/AFB). CULLIN1-neddylation is required for SCF

Indexed as

ProteolysisArabidopsisArabidopsis ProteinsF-Box ProteinsGene Expression Regulation, PlantIndoleacetic AcidsNEDD8 ProteinPlant DevelopmentPlant Growth RegulatorsPlants, Genetically ModifiedReceptors, Cell SurfaceSeedlingsSignal TransductionSKP Cullin F-Box Protein LigasesTranscription FactorsTranscription, GeneticArabidopsis ProteinsF-Box Proteinsindoleacetic acidIndoleacetic AcidsNEDD8 ProteinPlant Growth RegulatorsReceptors, Cell SurfaceSKP Cullin F-Box Protein LigasesTranscription Factorsauxinchemical biologyhormone perceptionprohormoneselective agonist

Identifiers

PMID30850516
PMCPMC6442611
OpenAlexW2950161037

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.