Evidence map›Paper›PMID 30847096›Full record

ArticleEcology and evolution2019

Comparing RADseq and microsatellites for estimating genetic diversity and relatedness - Implications for brown trout conservation.

Alexandre Lemopoulos, Jenni M Prokkola, Silva Uusi-Heikkilä, Anti Vasemägi, Ari Huusko, Pekka Hyvärinen, Marja-Liisa Koljonen, Jarmo Koskiniemi, Anssi Vainikka

Abstract read
In one paragraph

Article in Ecology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed.

  1. Article
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  3. Genetic Differences in Purple Finch (Ecology and evolution · 2026
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  17. Article
  18. International journal of molecular sciences · 2024
    Article
  19. Article
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Alexandre LemopoulosDepartment of Environmental and Biological Sciences University of Eastern Finland Joensuu Finland.ORCID https://orcid.org/0000-0002-7997-5526
Jenni M ProkkolaDepartment of Environmental and Biological Sciences University of Eastern Finland Joensuu Finland.ORCID https://orcid.org/0000-0003-2987-4417
Silva Uusi-HeikkiläDepartment of Biology University of Turku Turku Finland.ORCID https://orcid.org/0000-0001-6503-455X
Anti VasemägiDepartment of Biology University of Turku Turku Finland.ORCID https://orcid.org/0000-0002-2184-5534
Ari HuuskoNatural Resources Institute Finland (Luke), Kainuu Fisheries Research Station Paltamo Finland.
Pekka HyvärinenNatural Resources Institute Finland (Luke), Kainuu Fisheries Research Station Paltamo Finland.
Marja-Liisa KoljonenNatural Resources Institute Finland (Luke) Helsinki Finland.
Jarmo KoskiniemiDepartment of Agricultural Sciences University of Helsinki Helsinki Finland.
Anssi VainikkaDepartment of Environmental and Biological Sciences University of Eastern Finland Joensuu Finland.ORCID https://orcid.org/0000-0002-0172-5615

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The conservation and management of endangered species requires information on their genetic diversity, relatedness and population structure. The main genetic markers applied for these questions are microsatellites and single nucleotide polymorphisms (SNPs), the latter of which remain the more resource demanding approach in most cases. Here, we compare the performance of two approaches, SNPs obtained by restriction-site-associated DNA sequencing (RADseq) and 16 DNA microsatellite loci, for estimating genetic diversity, relatedness and genetic differentiation of three, small, geographically close wild brown trout (

Indexed as

ddRADseqfisheriespopulation geneticsrelatednesssalmonids

Identifiers

PMID30847096
PMCPMC6392366

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.