Evidence map›Paper›PMID 30846799›Full record

ArticleScientific reports2019

Comparison of the functional properties of trimeric and monomeric CaiT of Escherichia coli.

Susanne Bracher, Daniel Hilger, Kamila Guérin, Yevhen Polyhach, Gunnar Jeschke, Ralph Krafczyk, Giacomo Giacomelli, Heinrich Jung

Abstract readComparative Study
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. L-Carnitine Production Through Biosensor-Guided Construction of theFrontiers in bioengineering and biotechnology · 2021
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Susanne BracherDivision of Microbiology, Department of Biology 1, Ludwig Maximilians University Munich, D-82152, Martinsried, Germany.
Daniel HilgerDivision of Microbiology, Department of Biology 1, Ludwig Maximilians University Munich, D-82152, Martinsried, Germany.
Kamila GuérinETH Zurich, Laboratory of Physical. Chemistry, Vladimir-Prelog-Weg 2, Zurich, CH-8093, Switzerland.
Yevhen PolyhachETH Zurich, Laboratory of Physical. Chemistry, Vladimir-Prelog-Weg 2, Zurich, CH-8093, Switzerland.
Gunnar JeschkeETH Zurich, Laboratory of Physical. Chemistry, Vladimir-Prelog-Weg 2, Zurich, CH-8093, Switzerland.
Ralph KrafczykDivision of Microbiology, Department of Biology 1, Ludwig Maximilians University Munich, D-82152, Martinsried, Germany.
Giacomo GiacomelliDivision of Microbiology, Department of Biology 1, Ludwig Maximilians University Munich, D-82152, Martinsried, Germany.
Heinrich JungDivision of Microbiology, Department of Biology 1, Ludwig Maximilians University Munich, D-82152, Martinsried, Germany. hjung@lmu.de.ORCID 0000-0002-5450-3063

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Secondary transporters exist as monomers, dimers or higher state oligomers. The significance of the oligomeric state is only partially understood. Here, the significance of the trimeric state of the L-carnitine/γ-butyrobetaine antiporter CaiT of Escherichia coli was investigated. Amino acids important for trimer stability were identified and experimentally verified. Among others, CaiT-D288A and -D288R proved to be mostly monomeric in detergent solution and after reconstitution into proteoliposomes, as shown by blue native gel electrophoresis, gel filtration, and determination of intermolecular distances. CaiT-D288A was fully functional with kinetic parameters similar to the trimeric wild-type. Significant differences in amount and stability in the cell membrane between monomeric and trimeric CaiT were not observed. Contrary to trimeric CaiT, addition of substrate had no or only a minor effect on the tryptophan fluorescence of monomeric CaiT. The results suggest that physical contacts between protomers are important for the substrate-induced changes in protein fluorescence and the underlying conformational alterations.

Indexed as

Amino Acid SubstitutionAntiportersCell MembraneChromatography, GelCysteineDetergentsEscherichia coliEscherichia coli ProteinsProtein MultimerizationTryptophanAntiportersCaiT protein, E coliCysteineDetergentsEscherichia coli ProteinsTryptophan

Identifiers

PMID30846799
PMCPMC6406002

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.