Evidence map›Paper›PMID 30845228›Full record

ArticlePloS one2019

Drosophila melanogaster tPlus3a and tPlus3b ensure full male fertility by regulating transcription of Y-chromosomal, seminal fluid, and heat shock genes.

Tim Hundertmark, Sabrina Kreutz, Nastasja Merle, Andrea Nist, Boris Lamp, Thorsten Stiewe, Alexander Brehm, Renate Renkawitz-Pohl, Christina Rathke

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. International journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Tim HundertmarkDepartment of Biology, Developmental Biology, Philipps-Universität Marburg, Marburg, Germany.
Sabrina KreutzDepartment of Biology, Developmental Biology, Philipps-Universität Marburg, Marburg, Germany.
Nastasja MerleDepartment of Biology, Developmental Biology, Philipps-Universität Marburg, Marburg, Germany.
Andrea NistGenomics Core Facility, Center for Tumor- and Immunobiology, Philipps-Universität Marburg, Marburg, Germany.
Boris LampGenomics Core Facility, Center for Tumor- and Immunobiology, Philipps-Universität Marburg, Marburg, Germany.
Thorsten StieweGenomics Core Facility, Center for Tumor- and Immunobiology, Philipps-Universität Marburg, Marburg, Germany.
Alexander BrehmInstitute of Molecular Biology and Tumor Research (IMT), Biomedical Research Centre (BMFZ), Philipps-Universität Marburg, Marburg, Germany.
Renate Renkawitz-PohlDepartment of Biology, Developmental Biology, Philipps-Universität Marburg, Marburg, Germany.ORCID 0000-0002-4695-0824
Christina RathkeDepartment of Biology, Developmental Biology, Philipps-Universität Marburg, Marburg, Germany.
Philipps University of Marburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spermatogenesis in Drosophila melanogaster is characterized by a specific transcriptional program during the spermatocyte stage. Transcription of thousands of genes is regulated by the interaction of several proteins or complexes, including a tTAF-containing TFIID variant, tMAC, Mediator, and chromatin interactors, e.g., bromodomain proteins. We addressed how distinct subsets of target genes are selected. We characterized the highly similar proteins tPlus3a and tPlus3b, which contain a Plus3 domain and are enriched in the testis, mainly in spermatocytes. In tPlus3a and tplus3b deletion mutants generated using the CRISPR/Cas9 system, fertility was severely reduced and sperm showed defects during individualization. tPlus3a and tPlus3b heterodimerized with the bromodomain protein tBRD-1. To elucidate the role of the tPlus3a and tPlus3b proteins in transcriptional regulation, we determined the transcriptomes of tplus3a-tplus3b and tbrd-1 deletion mutants using next-generation sequencing (RNA-seq) and compared them to that of the wild-type. tPlus3a and tPlus3b positively or negatively regulated the expression of nearly 400 genes; tBRD-1 regulated 1,500 genes. Nearly 200 genes were regulated by both tPlus3a and tPlus3b and tBRD-1. tPlus3a and tPlus3b activated the Y-chromosomal genes kl-3 and kl-5, which indicates that tPlus3a and tPlus3b proteins are required for the function of distinct classes of genes. tPlus3a and tPlus3b and tBRD-1 repress genes relevant for seminal fluid and heat shock. We hypothesize that tPlus3a and tPlus3b proteins are required to specify the general transcriptional program in spermatocytes.

Indexed as

AnimalsDimerizationDrosophila melanogasterDrosophila ProteinsFertilityHeat-Shock ProteinsHigh-Throughput Nucleotide SequencingMaleRNA InterferenceSequence Analysis, RNASpermatocytesTranscription, GeneticY ChromosomeDrosophila ProteinsHeat-Shock Proteins

Identifiers

PMID30845228
PMCPMC6405060
OpenAlexW2920830160

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.