Evidence map›Paper›PMID 30843252›Full record

ArticleJournal of clinical laboratory analysis2019

The clinical significance of HOXA9 promoter hypermethylation in head and neck squamous cell carcinoma.

Chongchang Zhou, Jinyun Li, Qun Li, Huigao Liu, Dong Ye, Zhenhua Wu, Zhisen Shen, Hongxia Deng

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Review
  7. HOXA9 Regulome and Pharmacological Interventions in Leukemia.Advances in experimental medicine and biology · 2024
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Methylation inCells · 2020
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Chongchang ZhouDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, China.ORCID https://orcid.org/0000-0002-8728-6819
Jinyun LiDepartment of Oncology and Hematology, The Affiliated Hospital of Medical School of Ningbo University, Ningbo, China.
Qun LiDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, China.
Huigao LiuDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Zhenhai Longsai Hospital, Ningbo, China.
Dong YeDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, China.ORCID https://orcid.org/0000-0003-2055-0256
Zhenhua WuDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center, Lihuili Eastern Hospital, Ningbo, China.
Zhisen ShenDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, China.ORCID https://orcid.org/0000-0001-6660-0488
Hongxia DengDepartment of Otorhinolaryngology Head and Neck Surgery, Ningbo Medical Center Lihuili Hospital, Ningbo, China.
Ningbo Medical Center Lihuili Hospital · CNNingbo No.6 Hospital · CNNingbo University · CN

Funding

Oncology Research Training for Surgeon-ScientistsT32CA160003 · NCI · UNIVERSITY OF KENTUCKY · PI Bernard Mark Evers, Pamela Carmen Hull · 2011 to 2026
$3.2M
Ningbo Health Branding Subject Fund PPXK2018-02the Medical and Health Research Project of Zhejiang Province No. 2012ZDA042the Medical and Health Training Project of Zhejiang Province No. 2014PYA017the Ningbo Natural Science Foundation No. 2015A610221the Ningbo Natural Science Foundation No. 2017A610236the Scientific Innovation Team Project of Ningbo No. 2012B82019Zhejiang Provincial Natural Science Foundation No. LY14H160003
6 · The paper itself

Abstract

backgroundThe purpose of the current study was to assess the association between HOXA9 (homeobox A9) promoter methylation and head and neck squamous cell carcinoma (HNSCC) and its diagnostic value.

methodsQuantitative methylation-specific PCR (qMSP) was applied to measure HOXA9 promoter methylation levels in 145 paired HNSCC and corresponding normal tissue samples. Data from the Cancer Genome Atlas (TCGA) database (n = 578; 528 HNSCC and 50 normal) were also analyzed.

resultsSignificantly higher levels of HOXA9 promoter methylation were detected in HNSCC, compared with normal, tissues (our cohort: P = 1.06E-35; TCGA cohort: P = 3.06E-39). Moreover, HOXA9 methylation was significantly increased in patients with advanced tumor (T) stage, lymph node metastasis, and advanced clinical stage. Areas under the receiver characteristic curves (AUCs) based on our cohort and TCGA data were 0.930 and 0.967, respectively.

conclusionIn summary, our study reveals that HOXA9 promoter hypermethylation contributes to the risk of HNSCC and its progression and metastasis. Additionally, HOXA9 hypermethylation is a potential biomarker for the early diagnosis and screening of patients with HNSCC.

Indexed as

AgedDNA MethylationFemaleGene Expression Regulation, NeoplasticHead and Neck NeoplasmsHomeodomain ProteinsHumansMaleMiddle AgedPromoter Regions, GeneticROC CurveSquamous Cell Carcinoma of Head and Neckhomeobox protein HOXA9Homeodomain ProteinsdiagnosisHNSCCHOXA9metastasismethylation

Identifiers

PMID30843252
PMCPMC6595302
OpenAlexW2921705266

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.