Evidence map›Paper›PMID 30842412›Full record

ArticleNature communications2019

Ufbp1 promotes plasma cell development and ER expansion by modulating distinct branches of UPR.

Huabin Zhu, Brinda Bhatt, Sathish Sivaprakasam, Yafei Cai, Siyang Liu, Sai Karthik Kodeboyina, Nikhil Patel, Natasha M Savage, Ashok Sharma, Randal J Kaufman and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 114 citations in OpenAlex.

  1. Review
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  3. Article
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  7. Review
  8. DDRGK1 preserves intervertebral disc development through ufmylation.Cellular and molecular life sciences : CMLS · 2025
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Control of Rhizobia Endosymbiosis by Coupling ER Expansion with Enhanced UPR.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  16. Review
  17. UFL1 promotes survival and function of virtual memory CD8 T cells.Journal of immunology (Baltimore, Md. : 1950) · 2025
    Article
  18. Review
  19. Article
  20. Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Huabin ZhuDepartment of Biochemistry and Molecular Biology, Augusta University, Augusta, GA, 30912, USA.
Brinda BhattDepartment of Biochemistry and Molecular Biology, Augusta University, Augusta, GA, 30912, USA.
Sathish SivaprakasamDepartment of Biochemistry and Molecular Biology, Augusta University, Augusta, GA, 30912, USA.
Yafei CaiCollege of Animal Science and Technology, Nanjing Agricultural University, 1 Weigang, Nanjing, 210095, Jiangsu Province, China.
Siyang LiuDepartment of Biochemistry and Molecular Biology, Augusta University, Augusta, GA, 30912, USA.
Sai Karthik KodeboyinaCenter for Biotechnology and Genomic Medicine, Augusta University, Augusta, GA, 30912, USA.
Nikhil PatelDepartment of Pathology, Augusta University, Augusta, GA, 30912, USA.ORCID http://orcid.org/0000-0001-9335-0082
Natasha M SavageDepartment of Pathology, Augusta University, Augusta, GA, 30912, USA.
Ashok SharmaCenter for Biotechnology and Genomic Medicine, Augusta University, Augusta, GA, 30912, USA.
Randal J KaufmanDegenerative Diseases Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, 92307, USA.ORCID http://orcid.org/0000-0003-4277-316X
Honglin LiDepartment of Biochemistry and Molecular Biology, Augusta University, Augusta, GA, 30912, USA.
Nagendra SinghDepartment of Biochemistry and Molecular Biology, Augusta University, Augusta, GA, 30912, USA. nasingh@augusta.edu.ORCID http://orcid.org/0000-0003-2540-6990
Augusta University · USNanjing Agricultural University · CNSanford Burnham Prebys Medical Discovery Institute · USTexas Tech University · US

Funding

ER stress and UPR in non-alcoholic steatohepatitis and hepatocellular carcinomaR01CA198103 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI KAUFMAN, RANDAL J. · 2016 to 2020
$3.4M
Homeostatic Role of IRE1a-XBP1-PDI1 in Hepatic Lipid MetabolismR01DK103185 · NIDDK · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI KAUFMAN, RANDAL J. · 2015 to 2019
$2.9M
Mechanism of ER Protein Misfolding-Induced Mitochondrial DysfunctionR01DK113171 · NIDDK · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI KAUFMAN, RANDAL J. · 2017 to 2020
$2.5M
Essential role of the Ufm1 E3 ligase in intestinal homeostasisR01DK113409 · NIDDK · AUGUSTA UNIVERSITY · PI LI, HONGLIN · 2017 to 2020
$1.4M
Regulation of colonic inflammation by butyrate/niacin receptor Gpr109aR01DK103576 · NIDDK · AUGUSTA UNIVERSITY · PI SINGH, NAGENDRA · 2014 to 2017
$1.3M
NCI NIH HHS R01 CA198103NIDDK NIH HHS R01 DK103185NIDDK NIH HHS R01 DK103576NIDDK NIH HHS R01 DK113171NIDDK NIH HHS R01 DK113409NIH HHS R01 CA198103NIH HHS R01 DK103185NIH HHS R01 DK113171NIH HHS R01 DK113409
6 · The paper itself

Abstract

The IRE1α/XBP1 branch of unfolded protein response (UPR) pathway has a critical function in endoplasmic reticulum (ER) expansion in plasma cells via unknown mechanisms; interestingly, another UPR branch, PERK, is suppressed during plasma cell development. Here we show that Ufbp1, a target and cofactor of the ufmylation pathway, promotes plasma cell development by suppressing the activation of PERK. By contrast, the IRE1α/XBP1 axis upregulates the expression of Ufbp1 and ufmylation pathway genes in plasma cells, while Ufbp1 deficiency impairs ER expansion in plasma cells and retards immunoglobulin production. Structure and function analysis suggests that lysine 267 of Ufbp1, the main lysine in Ufbp1 that undergoes ufmylation, is dispensable for the development of plasmablasts, but is required for immunoglobulin production and stimulation of ER expansion in IRE1α-deficient plasmablasts. Thus, Ufbp1 distinctly regulates different branches of UPR pathway to promote plasma cell development and function.

Indexed as

Cell DifferentiationAdaptor Proteins, Signal TransducingAnimalsCarrier ProteinsCell LineeIF-2 KinaseEndoplasmic ReticulumEndoribonucleasesFemaleImmunity, HumoralLysineMaleMiceMice, Inbred C57BLMutationPlasma CellsAdaptor Proteins, Signal TransducingCarrier ProteinsDDRGK1 protein, humaneIF-2 KinaseEndoribonucleasesErn1 protein, mouseLysineProtein Serine-Threonine KinasesRecombinant ProteinsUFM1-binding protein 1 containing a PCI domain, mouseX-Box Binding Protein 1Xbp1 protein, mouse

Identifiers

PMID30842412
PMCPMC6403283
OpenAlexW2918631811

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.