Evidence map›Paper›PMID 30842318›Full record

ArticleJournal of virology2019

Guinea Fowl Coronavirus Diversity Has Phenotypic Consequences for Glycan and Tissue Binding.

Kim M Bouwman, Mattias Delpont, Frederik Broszeit, Renaud Berger, Erik A W S Weerts, Marie-Noëlle Lucas, Maxence Delverdier, Sakhia Belkasmi, Andreas Papanikolaou, Geert-Jan Boons and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Animal Coronaviruses in the Light of COVID-19.Journal of veterinary research · 2020
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Kim M BouwmanDepartment of Pathobiology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Mattias DelpontIHAP, Université de Toulouse, INRA, ENVT, Toulouse, France.
Frederik BroszeitDepartment of Chemical Biology and Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands.
Renaud BergerIHAP, Université de Toulouse, INRA, ENVT, Toulouse, France.
Erik A W S WeertsDepartment of Pathobiology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Marie-Noëlle LucasIHAP, Université de Toulouse, INRA, ENVT, Toulouse, France.
Maxence DelverdierIHAP, Université de Toulouse, INRA, ENVT, Toulouse, France.
Sakhia BelkasmiIHAP, Université de Toulouse, INRA, ENVT, Toulouse, France.
Andreas PapanikolaouDepartment of Pathobiology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Geert-Jan BoonsDepartment of Chemical Biology and Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands.
Jean-Luc GuérinIHAP, Université de Toulouse, INRA, ENVT, Toulouse, France.
Robert P de VriesDepartment of Chemical Biology and Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands.
Mariette F DucatezIHAP, Université de Toulouse, INRA, ENVT, Toulouse, France m.ducatez@envt.fr m.h.verheije@uu.nl.
Monique H VerheijeDepartment of Pathobiology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands m.ducatez@envt.fr m.h.verheije@uu.nl.
Utrecht University · NLÉcole Nationale Vétérinaire de Toulouse · FRUniversité de Toulouse · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Guinea fowl coronavirus (GfCoV) causes fulminating enteritis that can result in a daily death rate of 20% in guinea fowl flocks. Here, we studied GfCoV diversity and evaluated its phenotypic consequences. Over the period of 2014 to 2016, affected guinea fowl flocks were sampled in France, and avian coronavirus presence was confirmed by PCR on intestinal content and immunohistochemistry of intestinal tissue. Sequencing revealed 89% amino acid identity between the viral attachment protein S1 of GfCoV/2014 and that of the previously identified GfCoV/2011. To study the receptor interactions as a determinant for tropism and pathogenicity, recombinant S1 proteins were produced and analyzed by glycan and tissue arrays. Glycan array analysis revealed that, in addition to the previously elucidated biantennary di-

Indexed as

AnimalsCoronavirusCoronavirus InfectionsEnteritisFranceGalliformesGammacoronavirusGenetic VariationPhenotypePolysaccharidesReceptors, VirusSialic AcidsSpike Glycoprotein, CoronavirusViral TropismVirus AttachmentPolysaccharidesReceptors, VirusSialic AcidsSpike Glycoprotein, Coronaviruscoronavirusglycan receptorguinea fowlreceptor affinityspike proteintissue tropism

Identifiers

PMID30842318
PMCPMC6498037
OpenAlexW2920152185

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.